Thank you for your quick response. On Wed, Dec 18, 2019 at 11:57 PM Elaine Meng <meng@cgl.ucsf.edu> wrote:
Dear Rajarshi Roy, The command in ChimeraX to match small molecules is “align” (not “match,” which is the same as “matchmaker” and works for biopolymers).
<http://rbvi.ucsf.edu/chimerax/docs/user/commands/align.html>
The error message is wrong! Sorry about that, we will fix it. I guess the error message was copied from Chimera to ChimeraX without updating the wording.
Apologies for the inconvenience. Best, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Dec 17, 2019, at 10:28 PM, Rajarshi Roy <phd1701171011@iiti.ac.in> wrote:
Dear ChimeraX, I am trying to superimpose multiple carbohydrate chains using chimeraX. Using match command, I am unable to do the same. Here is my command: match #2:1-4 to #1:1-4 But I am getting the following error: Reference and/or match model contains no nucleic or amino acid chains. Use the command-line 'match' command to superimpose small molecules/ligands.
Already I am using match command, still why the same error is showing? Please advise me on how to proceed? Thank you in advance.
-- with regards Rajarshi Roy
-- *with regards* *Rajarshi Roy* *PhD Research Scholar* *Biosciences and Biomedical Engineering* *Indian Institute of Technology, Indore* *India*