Yes, thank you very much! Yours sincerely Enrico Il giorno mer 25 set 2024 alle ore 17:40 Elaine Meng <meng@cgl.ucsf.edu> ha scritto:
Hello, That is not a bug:
As it says in the help for the "size" command, "ballScale" always applies to the whole model. <https://rbvi.ucsf.edu/chimerax/docs/user/commands/size.html>
To change the ball size individually per atom or residue within a model, you would have to change the "atomRadius" instead. For each atom, the final size = atomRadius X ballScale. However, that will change the results of other calculations that use atomRadius, such as molecular surface, contacts/clashes, etc.
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 25, 2024, at 3:42 AM, Enrico Martinez via ChimeraX-users < chimerax-users@cgl.ucsf.edu> wrote:
Dear ChimeraX users !
I've just found a small bug in the protein-ligand representation.
if I try to change the representation of ball and sticks using: style protein ball size protein ballScale 0.18
it changes the ball representation for the both protein and ligand (e.g. defined as :lig in the system).
While there is not problems with sticks: size protein stickRadius 0.12 size :lig stickRadius 0.18 So it can be applied selectively on the both selections
Many thanks in advance for any suggestions !
Enrico