On Tue, Jul 14, 2020 at 11:31 AM <chimerax-users-request@cgl.ucsf.edu> wrote:

Send ChimeraX-users mailing list submissions to chimerax-users@cgl.ucsf.edu

To subscribe or unsubscribe via the World Wide Web, visit https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users or, via email, send a message with subject or body 'help' to chimerax-users-request@cgl.ucsf.edu

You can reach the person managing the list at chimerax-users-owner@cgl.ucsf.edu

When replying, please edit your Subject line so it is more specific than "Re: Contents of ChimeraX-users digest..."

Today's Topics:

1. Re: re-assignment of mousemode (Elaine Meng) 2. Re: re-assignment of mousemode (piskacek@post.cz) 3. Re: re-assignment of mousemode (Elaine Meng) 4. Fwd: [Chimera-users] re-assignment of mousemode (Elaine Meng)

----------------------------------------------------------------------

Message: 1 Date: Mon, 13 Jul 2020 13:45:33 -0700 From: Elaine Meng <meng@cgl.ucsf.edu> To: "<piskacek@post.cz>" <piskacek@post.cz> Cc: ChimeraX Users Help <chimerax-users@cgl.ucsf.edu> Subject: Re: [chimerax-users] re-assignment of mousemode Message-ID: <3BB2DAA6-5B94-4965-B973-F72CFA5E2CFC@cgl.ucsf.edu> Content-Type: text/plain; charset=us-ascii

Another way to set pivot (without changing mouse-button functions) is by:

(1) selecting an atom (Ctrl-click on the atom in the graphics window) that you want as the center of rotation (2) using menu: Actions... Set Pivot

Elaine

...

On Jul 13, 2020, at 1:00 PM, Elaine Meng <meng@cgl.ucsf.edu> wrote:

Hi Martin, It is not clear what you mean by "no response." Do you have a mouse with a right button, or can you use trackpad + Alt as the right button? If you click any other icons in the Right Mouse tab of the Toolbar, can you successfully assign any of those other functions to the right mouse button?

Maybe it is a misunderstanding of how the icons work: If it is working correctly, nothing will happen when you click a RIght Mouse icon, except that there will be a light green box around that icon. Clicking the icon only reassigns the function of the right mouse button, but does not perform any action at that time. However, if you reassign to pivot by clicking the Right Mouse pivot icon, for example, then later clicking with the right mouse button (if you have one) on an atom will make that atom the pivot point.

<http://rbvi.ucsf.edu/chimerax/docs/user/tools/mousemodes.html>

If you do not have a right mouse button, you can use the "mousemode" command (instead of icons) to assign the function to a different mouse button. <http://rbvi.ucsf.edu/chimerax/docs/user/commands/ui.html#mousemode>

I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco

...

On Jul 13, 2020, at 9:02 AM, <piskacek@post.cz> <piskacek@post.cz> wrote:

Dear Authors of ChimeraX,

I load and start to use your very useful program ChimeraX on Windows 10 (Alienware 17 x64, I7-4900MQ 2.8GHz, RAM 32GB, GeForce GTX 780M),

I could do the same and more as in PyMol, but I have trouble with re-assignment of mousemode in window "Right Mouse" as result is no response for re-assignment into Pivot or Rotate model

I tried ChimeraX versions 0,93, 1.0 and 1.1 (daily version) w/o improvement

Please, could you help me Thank you very much for support

_______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users

------------------------------

Message: 2 Date: Mon, 13 Jul 2020 23:48:44 +0200 (CEST) From: <piskacek@post.cz> To: "ChimeraX Users Help" <chimerax-users@cgl.ucsf.edu> Subject: Re: [chimerax-users] re-assignment of mousemode Message-ID: <KC.3Mchj.NQenTdcZLM.1V3DQy@seznam.cz> Content-Type: text/plain; charset="utf-8"

exactly? all as you described all this is not working

I assigned what my wright? mouse should execute,?

but if I try to apply this function on amino acid from my protein it is not working

Should I need to activate my mousemode somehow?

I? suppose, that ChimeraX? is not working properly on windows in my case I need some correction of some script to solve some hidden conflict in windows

thank you very much for you help -- Martin Piskacek Laboratory of Cancer Biology and Genetics? www.piskacek.org Department of Pathological Physiology Faculty of Medicine Masaryk University Brno Kamenice 5 625 00 Brno Czech Republic

---------- P?vodn? e-mail ---------- Od: Elaine Meng <meng@cgl.ucsf.edu> Komu: <piskacek@post.cz> <piskacek@post.cz> Datum: 13. 7. 2020 22:45:47 P?edm?t: Re: [chimerax-users] re-assignment of mousemode "Another way to set pivot (without changing mouse-button functions) is by:

(1) selecting an atom (Ctrl-click on the atom in the graphics window) that you want as the center of rotation (2) using menu: Actions... Set Pivot

Elaine

...

On Jul 13, 2020, at 1:00 PM, Elaine Meng <meng@cgl.ucsf.edu> wrote:

Hi Martin, It is not clear what you mean by "no response." Do you have a mouse with a right button, or can you use trackpad + Alt as the right button? If you click any other icons in the Right Mouse tab of the Toolbar, can you successfully assign any of those other functions to the right mouse button?

Maybe it is a misunderstanding of how the icons work: If it is working correctly, nothing will happen when you click a RIght Mouse icon, except that there will be a light green box around that icon. Clicking the icon only reassigns the function of the right mouse button, but does not perform any action at that time. However, if you reassign to pivot by clicking the Right Mouse pivot icon, for example, then later clicking with the right mouse button (if you have one) on an atom will make that atom the pivot point.

<http://rbvi.ucsf.edu/chimerax/docs/user/tools/mousemodes.html>

If you do not have a right mouse button, you can use the "mousemode" command (instead of icons) to assign the function to a different mouse button. <http://rbvi.ucsf.edu/chimerax/docs/user/commands/ui.html#mousemode>

I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco

...

On Jul 13, 2020, at 9:02 AM, <piskacek@post.cz> <piskacek@post.cz> wrote:

...

...

Dear Authors of ChimeraX,

I load and start to use your very useful program ChimeraX on Windows 10 (Alienware 17 x64, I7-4900MQ 2.8GHz, RAM 32GB, GeForce GTX 780M),

I could do the same and more as in PyMol, but I have trouble with re-assignment of mousemode in window "Right Mouse" as result is no response for re-assignment into Pivot or Rotate model

I tried ChimeraX versions 0,93, 1.0 and 1.1 (daily version) w/o

improvement

...

Please, could you help me Thank you very much for support

_______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users

"