Issue with the coordset slider in chimeraX
Hi everyone, I am starting to take steps into ChimeraX handlers of MD simulations. So far, there have been no problems loading the starting PDB file and the trajectory. However, I am unable to make the coordset slider work. I always have the minimal version with the frame slider, the snail, and the recording button. Nothing happens when running the coordset slide #number_of_the_model. So, I can not make distance plotting and so on. I tried different versions of the software, including the latest daily build and the most recent production release. Thanks a lot for telling me what I do wrong and, if not readily implemented, please apologize for my impatience ;-) Cheers JD
Hi JD, The "coordset slider" command is just to show the slider with the buttons, which it sounds like you did already get. <https://rbvi.ucsf.edu/chimerax/docs/user/commands/coordset.html#slider> Then you use the buttons on that slider GUI to play the trajectory, or to show its context menu for plotting etc. There is a triangle "play" button that changes into a vertical lines "pause" button -- just like playing a video on YouTube. A context menu is shown by right-clicking (or on Mac, Ctrl-clicking) on the tool window. <https://rbvi.ucsf.edu/chimerax/docs/user/window.html#context-menu> I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Oct 4, 2025, at 10:29 AM, Maréchal, Jean-Didier via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hi everyone,
I am starting to take steps into ChimeraX handlers of MD simulations. So far, there have been no problems loading the starting PDB file and the trajectory. However, I am unable to make the coordset slider work. I always have the minimal version with the frame slider, the snail, and the recording button. Nothing happens when running the coordset slide #number_of_the_model. So, I can not make distance plotting and so on.
I tried different versions of the software, including the latest daily build and the most recent production release.
Thanks a lot for telling me what I do wrong and, if not readily implemented, please apologize for my impatience ;-)
Cheers JD
participants (2)
-
Elaine Meng -
jeandidier.marechal@uab.cat