Dear all,
Is there a way in ChimeraX to make a selection by segid (column 73-76 in pdb format from CHARMM of XPLOR)? Thanks in advance. Philippe Cuniasse.
----------------------------------------------- Philippe Cuniasse, PhD/HDR. Institut de Biologie Integrative de la cellule. UMR 9198 CNRS-CEA-Univ Paris Sud Bat 144 CE-Saclay 91191 Gif-sur-Yvette Cedex France Tel: (33) 1 69 08 56 35 Fax: (33) 1 69 08 47 12 Email: philippe.cuniasse@cea.frmailto:philippe.cuniasse@cea.fr Web: http://biodev.cea.fr/rasmot3d/
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Hi Philippe, No, this is not currently possible in ChimeraX. I will open an enhancement-request ticket in our bug-tracking database for it, with you cc'ed so that you will know when progress occurs. It may take awhile to get to given our other development priorities.
--Eric
Eric Pettersen UCSF Computer Graphics Lab
On Oct 26, 2022, at 2:37 AM, CUNIASSE Philippe via ChimeraX-users chimerax-users@cgl.ucsf.edu wrote:
Dear all,
Is there a way in ChimeraX to make a selection by segid (column 73-76 in pdb format from CHARMM of XPLOR)? Thanks in advance. Philippe Cuniasse.
Philippe Cuniasse, PhD/HDR. Institut de Biologie Integrative de la cellule. UMR 9198 CNRS-CEA-Univ Paris Sud Bat 144 CE-Saclay 91191 Gif-sur-Yvette Cedex France Tel: (33) 1 69 08 56 35 Fax: (33) 1 69 08 47 12 Email: philippe.cuniasse@cea.fr mailto:philippe.cuniasse@cea.fr Web: http://biodev.cea.fr/rasmot3d/ http://biodev.cea.fr/rasmot3d/
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Hi eric
thank you so much for your answer.
I think it is important because for those guys playing with CHARMM/NAMD/XPLOR pdb file that shifting from PyMol (Where segid specification exists in the sele command) to ChimeraX (my case), it will really be a nice option. Also because chainid does not exists in these pdb format.
Thank you again.
Best regards.
Philippe
________________________________ De : Eric Pettersen pett@cgl.ucsf.edu Envoyé : mercredi 26 octobre 2022 20:45:11 À : CUNIASSE Philippe Cc : chimerax-users@cgl.ucsf.edu Objet : Re: [chimerax-users] Selection by segid
Hi Philippe, No, this is not currently possible in ChimeraX. I will open an enhancement-request ticket in our bug-tracking database for it, with you cc'ed so that you will know when progress occurs. It may take awhile to get to given our other development priorities.
--Eric
Eric Pettersen UCSF Computer Graphics Lab
On Oct 26, 2022, at 2:37 AM, CUNIASSE Philippe via ChimeraX-users <chimerax-users@cgl.ucsf.edumailto:chimerax-users@cgl.ucsf.edu> wrote:
Dear all,
Is there a way in ChimeraX to make a selection by segid (column 73-76 in pdb format from CHARMM of XPLOR)? Thanks in advance. Philippe Cuniasse.
----------------------------------------------- Philippe Cuniasse, PhD/HDR. Institut de Biologie Integrative de la cellule. UMR 9198 CNRS-CEA-Univ Paris Sud Bat 144 CE-Saclay 91191 Gif-sur-Yvette Cedex France Tel: (33) 1 69 08 56 35 Fax: (33) 1 69 08 47 12 Email: philippe.cuniasse@cea.frmailto:philippe.cuniasse@cea.fr Web: http://biodev.cea.fr/rasmot3d/
<image001.png><image002.png><image003.png> ----------------------------------------------- _______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edumailto:ChimeraX-users@cgl.ucsf.edu Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users
participants (2)
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CUNIASSE Philippe
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Eric Pettersen