Hi all,
I don’t think it is possible to draw this kind of schematic representation (panel b) in ChimeraX, is it?
[cid:image001.png@01DA9A41.C6E2E040]
Thanks, Abhi
Sorry, no, there is no option to draw a schematic ribbon with circles showing the residues.
Probably they did it by hand in some custom diagram-drawing program. See if the publication says what they used. I know Biorender does some kinds of schematic diagrams but I don't know about this type of image specifically.
Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 29, 2024, at 11:33 AM, Das, Abhinaba via ChimeraX-users chimerax-users@cgl.ucsf.edu wrote:
Hi all,
I don’t think it is possible to draw this kind of schematic representation (panel b) in ChimeraX, is it?
<image001.png>
Thanks, Abhi _______________________________________________ ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/
Thanks. Not mentioned in that particular paper, but found it in another article (knew, I had seen it somewhere). Putting it here just in case: atom2svg.py (https://doi.org/10.5281/zenodo.4090924). Since, I had a small sequence I did it by hand, but if it is >50 it would be quite cumbersome. If one uses the script, one might need to change the chain ID.
thanks, Abhi
participants (3)
-
abhinaba.das@emory.edu
-
Das, Abhinaba
-
Elaine Meng