reduce gridpoints on the cryoEM map (640 x 640 x 640 ) to ( 320 x 320 x 320)
hi, i need to reduce the grid points to make the map work with MOE. I am not sure if this is possible in chimerax and i would appreciate some suggestions for creating a mrc file with reduced grid points. please let me know your thoughts. best amith
Hi Amith, You can do this with "volume bin": <https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#bin> I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 26, 2025, at 10:47 PM, amith via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
hi,
i need to reduce the grid points to make the map work with MOE. I am not sure if this is possible in chimerax and i would appreciate some suggestions for creating a mrc file with reduced grid points. please let me know your thoughts.
best amith
thank you that worked.. here is what i used for reference: volume bin #5 binSize 2 the resulting map had reduced no of grid points thanks again amith
participants (2)
-
arangarajan＠initialtx.com -
Elaine Meng