Re: [chimerax-users] [Chimera-users] Writesel command in chimeraX
Hi Prathvi, Please use the chimerax-users@cgl.ucsf.edu address to ask ChimeraX questions (instead of chimera-users@cgl.ucsf.edu) so that users will not be confused about which program we are discussing.
In ChimeraX you can use the "info" command to report the selection to the Log, as detailed in this previous post. https://www.rbvi.ucsf.edu/pipermail/chimerax-users/2022-July/003963.html
"info" help https://rbvi.ucsf.edu/chimerax/docs/user/commands/info.html
It does not have an option to save a file. Instead you have to save the ChimeraX Log in another step. You can use "log clear" before you use "info" and then "log save" to save to HTML file.
"log" help https://rbvi.ucsf.edu/chimerax/docs/user/commands/log.html
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Nov 26, 2022, at 5:04 AM, Prathvi Singh via Chimera-users chimera-users@cgl.ucsf.edu wrote:
Hi Elaine,
Is the writesel command available in chimeraX because I could not find it in the Actions menu? If not, then is any equivalent available apart from the command which saves selection as a new PDB file?
Thanks once again in advance
Next time I will keep in mind before mailing. Thanks for the answer.
On Mon, Nov 28, 2022 at 12:32 AM Elaine Meng meng@cgl.ucsf.edu wrote:
Hi Prathvi, Please use the chimerax-users@cgl.ucsf.edu address to ask ChimeraX questions (instead of chimera-users@cgl.ucsf.edu) so that users will not be confused about which program we are discussing.
In ChimeraX you can use the "info" command to report the selection to the Log, as detailed in this previous post. https://www.rbvi.ucsf.edu/pipermail/chimerax-users/2022-July/003963.html
"info" help https://rbvi.ucsf.edu/chimerax/docs/user/commands/info.html
It does not have an option to save a file. Instead you have to save the ChimeraX Log in another step. You can use "log clear" before you use "info" and then "log save" to save to HTML file.
"log" help https://rbvi.ucsf.edu/chimerax/docs/user/commands/log.html
I hope this helps, Elaine
Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Nov 26, 2022, at 5:04 AM, Prathvi Singh via Chimera-users <
chimera-users@cgl.ucsf.edu> wrote:
Hi Elaine,
Is the writesel command available in chimeraX because I could not find
it in the Actions menu?
If not, then is any equivalent available apart from the command which
saves selection as a new PDB file?
Thanks once again in advance
participants (2)
-
Elaine Meng
-
Prathvi Singh