Hi,
I'm currently working on building a membrane builder bundle and it requires the use of a python library called 'pdb_objects'.
Following the tutorial on the website, I'm adding the following line to my bundle_info.xml file under the dependencies tag:
<Dependency name="pdb_objects"/>
It still gives me an error of <No module named 'pdb_objects'> when I load my bundle in ChimeraX. How can I allow the use of this library in my bundle?
Thanks for your help!
Best Regards, Katie
Katie,
It looks like PDB objects on PyPI is called pdb-objects, not pdb_objects. For dependencies, ChimeraX looks for the package name and not the import name.
Best,
Tony ________________________________ From: ChimeraX-users chimerax-users-bounces@cgl.ucsf.edu on behalf of Zeng, Katie via ChimeraX-users chimerax-users@cgl.ucsf.edu Sent: Monday, February 21, 2022 11:50 AM To: ChimeraX Users Help chimerax-users@cgl.ucsf.edu Subject: [chimerax-users] Bundle dependency
[EXTERNAL SENDER - PROCEED CAUTIOUSLY]
Hi,
I'm currently working on building a membrane builder bundle and it requires the use of a python library called 'pdb_objects'.
Following the tutorial on the website, I'm adding the following line to my bundle_info.xml file under the dependencies tag:
<Dependency name="pdb_objects"/>
It still gives me an error of <No module named 'pdb_objects'> when I load my bundle in ChimeraX. How can I allow the use of this library in my bundle?
Thanks for your help!
Best Regards, Katie
participants (2)
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Anthony James Schaefer
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Zeng, Katie