Good day, Please I am running Chimera-x on windows11, and I cannot generate ramachdran plot. Kindly help. Thanks
*Emmanuel Funsho Alakunle* *Natural and Environmental Sciences (Biomedical Science)* *American University of Nigeria* *Yola-by-pass, PMB 2250, Yola* *Nigeria.*
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Good day Emmanuel,
ChimeraX does not have Ramachandran plot. You should use the other program Chimera instead.
in Chimera, Ramachandran plot is an option in the Model Panel and there is a "ramachandran" command:
https://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/ramachandran/ramachandran.html
Regards, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Dec 17, 2023, at 4:23 AM, Emmanuel Funsho Alakunle via ChimeraX-users chimerax-users@cgl.ucsf.edu wrote:
Good day, Please I am running Chimera-x on windows11, and I cannot generate ramachdran plot. Kindly help. Thanks
You can get a Ramachandran plot in ChimeraX by installing ISOLDE, though.
— Tristan
On Sun, 17 Dec 2023 at 17:14, Elaine Meng via ChimeraX-users < chimerax-users@cgl.ucsf.edu> wrote:
Good day Emmanuel,
ChimeraX does not have Ramachandran plot. You should use the other program Chimera instead.
in Chimera, Ramachandran plot is an option in the Model Panel and there is a "ramachandran" command:
< https://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/ramachandran/rama...
Regards, Elaine
Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Dec 17, 2023, at 4:23 AM, Emmanuel Funsho Alakunle via ChimeraX-users
chimerax-users@cgl.ucsf.edu wrote:
Good day, Please I am running Chimera-x on windows11, and I cannot generate
ramachdran plot.
Kindly help. Thanks
ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/
Thanks for the tip! I just tried it and it worked.
On Sun, Dec 17, 2023 at 6:20 PM Tristan Croll tcroll@altoslabs.com wrote:
You can get a Ramachandran plot in ChimeraX by installing ISOLDE, though.
— Tristan
On Sun, 17 Dec 2023 at 17:14, Elaine Meng via ChimeraX-users < chimerax-users@cgl.ucsf.edu> wrote:
Good day Emmanuel,
ChimeraX does not have Ramachandran plot. You should use the other program Chimera instead.
in Chimera, Ramachandran plot is an option in the Model Panel and there is a "ramachandran" command:
< https://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/ramachandran/rama...
Regards, Elaine
Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Dec 17, 2023, at 4:23 AM, Emmanuel Funsho Alakunle via
ChimeraX-users chimerax-users@cgl.ucsf.edu wrote:
Good day, Please I am running Chimera-x on windows11, and I cannot generate
ramachdran plot.
Kindly help. Thanks
ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/
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participants (3)
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Elaine Meng
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Emmanuel Funsho Alakunle
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Tristan Croll