Thank you so much Elaine - that worked perfectly! Cheers, Eden

On Jun 26, 2023, at 8:42 AM, Elaine Meng <meng@cgl.ucsf.edu> wrote:

[CAUTION: Non-UBC Email]

Hi Eden, You need ChimeraX version 1.6 or newer, and also instead of just opening it like a regular PDB file, you have to specify that it is a swissdock file when you open it. Namely, if you are using the command "open" you need to also include "format swissdock" or if you are using the menu File... Open, you need to change the file type in that dialog from "All files" to "SwissDock" before choosing and opening the file.

ChimeraX input formats: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#formats>

"open" command: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#local>

I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco

...

On Jun 25, 2023, at 9:50 AM, Fussner-Dupas, Eden via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:

Hello,

I am having trouble using ViewDockX with a file generated by Swissdock. When I open the clusters.dock4.pdb file it opens without issues - but when I try to use the ViewDockX tool to view each predicted pose one at a time I get the error “No suitable models found for ViewDockX”

Any help warmly appreciated

Cheers, Eden