Dear Chimera Team,
I am working on my own Chimera Extension. After succesful installation of
BioPython using Chimera's Python copy, I've encountered another BioPython -
related problem, that is also related to the numpy library.
I'm trying to import something from the BioPython library, and BioPython is
trying to import from numpy. I recieve a following error:
RuntimeError: module compiled against API version 8 but this version of
numpy is 7
...
File "/home/mateusz/pyry4.4/Modules/Trans/ComponentRepresentation.py",
line 6, in <module>
from Bio.PDB import PDBParser, PDBIO,
NeighborSearch
File
"/home/mateusz/.local/UCSF-Chimera64-1.8.1/lib/python2.7/site-packages/Bio/PDB/NeighborSearch.py",
line 10, in <module>
from Bio.KDTree import KDTree
File
"/home/mateusz/.local/UCSF-Chimera64-1.8.1/lib/python2.7/site-packages/Bio/KDTree/__init__.py",
line 10, in <module>
from KDTree import KDTree
File
"/home/mateusz/.local/UCSF-Chimera64-1.8.1/lib/python2.7/site-packages/Bio/KDTree/KDTree.py",
line 20, in <module>
from Bio.KDTree import _CKDTree