Hi Daniel, Please see the Rotamers tool. It can show all the rotamers (at least, all the ones in the rotamer library you specified) at a position: <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/rotamers/framerot.h...
The "Structure Analysis and Comparison" tutorial includes using the Rotamer tool: <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/tutorials/ squalene.html> Just a reminder, you can search the manual for terms such as "rotamer" with "Help... Search Documentation" in the Chimera menu. Best, Elaine ----- Elaine C. Meng, Ph.D. meng@cgl.ucsf.edu UCSF Computer Graphics Lab and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco http://www.cgl.ucsf.edu/home/meng/index.html On Dec 6, 2008, at 4:57 AM, daniel.hilger@lrz.uni-muenchen.de wrote:
Hi all, I want to visualize all possible rotamers of an amino acid side chain inside a protein structure in one picture. Is this possible or does the program only supports the visualization of one rotamer per side chain ? Many thanks !!! Daniel