18 Mar
2011
18 Mar
'11
10:34 a.m.
On Mar 18, 2011, at 9:39 AM, Tiziano Tuccinardi wrote:
Thanks Eric!! It works very well!! Is it also possible to save the alignment file without omitting the all-gap columns?
Hi Tiziano, I guess your question confuses me in two ways: 1) AFAIK, MatchMaker-generated alignments never have all-gap columns. 2) Although the MAV save dialog defaults to "omit all-gap columns", the script I sent doesn't. I would have to add few more lines of code to the script to get it to omit all-gap columns. Maybe you were assuming it was omitting them when it wasn't? --Eric Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu