Hi Ryan, The RMSD info is printed on standard output. If you are using any Unix-like shell, you can redirect standard output into a file with the '>' operator, something like: chimera --nogui script.cmd > chimera.out If you aren't using a Unix-like shell, perhaps you could describe how you are executing Chimera in nogui mode and we can go from there. --Eric Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu On Sep 10, 2008, at 2:00 PM, Ryan wrote:
Hi again,
I'd like to save the rmsd values calculated by chimera's 'rmsd' command when running in 'nogui' mode. What's the best way to go about this? Thanks!
-ryan _______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users