Dear all Is there a way using the sequence (or any other) tool in chimera to save a text file with sequence and corresponding secondary structure assignments as displayed in the sequence tool. Thanks Hernando
Just found that Save as and then choosing the Stockholm format (the last choice) does what I wanted (see below), but maybe there are other options. Thanks Hernando ________________________________ From: chimera-users-bounces@cgl.ucsf.edu [chimera-users-bounces@cgl.ucsf.edu] on behalf of Hernando J Sosa [hernando.sosa@einstein.yu.edu] Sent: Wednesday, November 23, 2016 3:48 PM To: chimera List Subject: [Chimera-users] Sequence tool This sender failed our fraud detection checks and may not be who they appear to be. Learn about spoofing<http://aka.ms/LearnAboutSpoofing> Feedback<http://aka.ms/SafetyTipsFeedback> Dear all Is there a way using the sequence (or any other) tool in chimera to save a text file with sequence and corresponding secondary structure assignments as displayed in the sequence tool. Thanks Hernando
Hi Hernando, That is the best approach. The other text output options (not EPS, which is more like an image) do not include annotations on the sequence. Best, Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco On Nov 23, 2016, at 1:32 PM, Hernando J Sosa <hernando.sosa@einstein.yu.edu> wrote:
Just found that Save as and then choosing the Stockholm format (the last choice) does what I wanted (see below), but maybe there are other options.
Thanks
Hernando
participants (2)
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Elaine Meng -
Hernando J Sosa