15 Jul
2026
15 Jul
'26
9:40 a.m.
Dear All, I am often opening AlphaFold 3 co-folding structures including small molecules in ChimeraX. In these models, ligands were provided as SMILES and are called LIG_X (with X being the chain label) in the AF3 output model.cif file. Opening these structures is very slow on my machine, because ChimeraX searches for a template for the ligands and finally fails with the warning "Unable to fetch template for 'LIG_X': will connect using distance criteria". Is there any workaround? E.g. by telling ChimeraX not to look for a template? Thank you for your help, Ute