Hi David, For the command documentation, use ChimeraX command "help openfold" or see the copy on our website: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/openfold.html#predict> Maybe you want the "samples" and "seed" options. There isn't a "recycle" option. Also you may need to get a recent daily build, as the openfold interface and associated command were added after the latest production release. I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 26, 2026, at 7:38 PM, David S. Fay via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hi,
I couldn’t find documentation regarding the correct syntax for running multiple models and using different seeds from the ChimeraX openfold platform. I tried something similar to what has worked for boltz: openfold predict #1/A #1/B recycle 3 seed 3 samples 5, but got an error (Expected a keyword). Tried a few other iterations but came up empty.
Thanks in advance.
David Fay