16 Apr
2024
16 Apr
'24
9:18 a.m.
Hello Elaine, I have a question, in chain A and chain B, I have identified the contact resides using the command ‘alphafold contacts /A to /B distance 3’. I want to write the chain A and B (for example /A Asn 431 — /B The 321) contact residues as file. How can also get the information on the blue and yellow interactions as well. I used the information you have provided in previous email, I can write only either chain but not the contact residue information that will help in protein-protein interactions. The example is provided in the below screen shot. Thank you. Amita
On Apr 2, 2024, at 4:30 PM, Elaine Meng <meng@cgl.ucsf.edu> wrote:
info residues sel saveFile ~/Desktop/residue-list 
