I tried using 0.1 but that doesn’t give me the outline for the region in front that I wanto highlight so I am using depth cue of 0.05 Get Outlook for iOS<https://aka.ms/o0ukef> ________________________________ From: Elaine Meng <meng@cgl.ucsf.edu> Sent: Sunday, August 4, 2024 11:54:41 AM To: Shubhangi Agarwal <sha4008@med.cornell.edu> Cc: chimerax-users@cgl.ucsf.edu <chimerax-users@cgl.ucsf.edu> Subject: [EXTERNAL] Re: [chimerax-users] Silhoutte Hi Shubhangi, I don't know why your silhouettes are generating so many extra lines, but there is a parameter you can adjust, "depthJump", e. g. command: graphics silhouettes true depthJump 0. 1 If you just use command: graphics silhouettes .. . it Hi Shubhangi, I don't know why your silhouettes are generating so many extra lines, but there is a parameter you can adjust, "depthJump", e.g. command: graphics silhouettes true depthJump 0.1 If you just use command: graphics silhouettes ...it will say in the Log what settings you have currently. See help for this command: <https://urldefense.com/v3/__https://rbvi.ucsf.edu/chimerax/docs/user/command...> However, since your display was also showing lots of little dots, maybe there is some other problem such as with your graphics driver. I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Aug 3, 2024, at 6:46 AM, Shubhangi Agarwal via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Dear developers,
I am trying to outline surfacerepresentation of my protein structure with the silhouette feature but it gives me black dashes along rest of the surface which I don’t want, how can I just use the black borderline feature for my surface and protein? Figure attached below.
Thank you
Shubhangi