Also, if the script needs arguments you can use the ‘runscript’ command, e.g.:
runscript “/path/to/python_script.py arg1 arg2”
—Eric
Eric Pettersen UCSF Computer Graphics Lab
On Jul 15, 2019, at 9:58 AM, Elaine Meng meng@cgl.ucsf.edu wrote:
Hi James, In both Chimera and ChimeraX you can just open python files or command script files with the “open” command (or menu: File.. Open). Opening the file executes the script.
http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#formats
Elaine
Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jul 15, 2019, at 2:55 AM, James Starlight jmsstarlight@gmail.com wrote:
P.S. here is an additional question about chimeraX
as I have found it is possible to execute python scrips directly in chimera-X https://www.cgl.ucsf.edu/chimerax/docs/devel/core/scripting.html what is the syntaxis for command line ? (e.g. load, like in Chimera, does not work here).
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