Hi,
I am a new user of chimera and I already have a question.
I have an protonated aspartic acid in my protein and I was wondering,
is it possible to add hydrogen atom to aspartic acid with chimera?
Thanks
Virginie
Hi Kyaw,
The only ways I can think of are:
- create a VRML file describing a surface with those points, read
into Chimera
- write a Python script to be opened in Chimera that reads in the
numbers and generates a Chimera surface model
However, I do not know the details about how to do either of these
things. Others, feel free to chime in!
Elaine
-----
Elaine C. Meng, Ph.D. meng(a)cgl.ucsf.edu
UCSF Computer Graphics Lab and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco
http://www.cgl.ucsf.edu/home/meng/index.html
Begin forwarded message:
> Hi Dr. Meng,
>
> I am sorry for my vague question.
>
> I have a table of numbers in a text file and I'd like to read in
> those numbers and convert them into cartesian coordinates so that
> they can be displayed as a surface in Chimera.
>
> If you could give me some suggestions on how to do it, I'd really
> appreciate it.
>
> Thank you,
> Kyaw
