April 2016 - compbio-allhands@cgl.ucsf.edu

[Compbio-allhands] 5/5/16 Seminar with David Savage
by Flowers, Nicole 29 Apr '16

29 Apr '16

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 (Please note: A lack of attendance in S-161 within the first 10 minutes of the start time will result in a cancellation of the simulcast.) David Savage UC Berkeley Fixed: Synthetic biological approaches for probing cellular physiology May 5, 2016 J. Fraser, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] helpers needed for Software Carpentry Workshops April 29 and 30 at Mission Bay
by Patricia C. Babbitt 26 Apr '16

26 Apr '16

The UCSF Library is hosting a Software Carpentry Python workshop this Friday and Saturday, April 29th and 30th at Mission Bay and we need your help to make it successful! We will have 80 UCSF researchers at this event – 46 beginners and 34 advanced beginners. Here is what we need: 1 person with technical competence in Python who is willing to be helpers to the Software Carpentry Instructors during both days of the bootcamp. Workshops will run from 9 - 5 on Friday and Saturday (workshop info can be found here:http://bsmith89.github.io/2016-04-29-ucsf/). As a helper you will have the interpersonal skills to spot people who are confused and help them get unstuck during the practical sessions. Helpers are vital to keeping workshops flowing smoothly. More details on the role of the helper is here:https://software-carpentry.org/workshops/checklists/helpers.html Here is what you will get if you are the right person for this role: * $100 Visa Gift Card * Breakfast and coffee/snacks each day * An opportunity to learn the material well enough to teach it yourself in the future * Credit on the workshop materials and you can put this effort on your CV as service to the UCSF community, showing you have teaching experience in these areas If you are interested in this opportunity please emailariel.deardorff(a)ucsf.edu<mailto:ariel.deardorff@ucsf.edu> to get more details and see if you are a good fit for this role. -- Patricia Babbitt Professor, Department of Bioengineering & Therapeutic Sciences and Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences Director, Graduate Program in Biological & Medical Informatics University of California, San Francisco UCSF MC 2550 Byers Hall Room508E 1700 4th Street San Francisco, CA 94143, USA Tel +1 (415) 476-3784 Fax +1 415-502-8193 Email: babbitt(a)cgl.ucsf.edu; Web http://babbittlab.ucsf.edu/ Assistant: Ms. Sydney Russell Leed, +1 415-514-1214, 415-514-9816 Sydney.RussellLeed(a)ucsf.edu <mailto:Sydney.RussellLeed@ucsf.edu>

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[Compbio-allhands] Fwd: IGBMC call for Group Leader positions
by Andrej Sali 26 Apr '16

26 Apr '16

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Associate Dean for Research, School of Pharmacy Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2552, Byers Hall Room 503B 1700 4th Street, San Francisco, CA 94143, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Administrative Assistant: Steve Ha, assistant(a)salilab.org <mailto:assistant@salilab.org>, Tel +1 (415) 514-4228, 502-8084 Email sali(a)salilab.org <mailto:sali@salilab.org>; Web http://salilab.org <http://salilab.org/> > Begin forwarded message: > > From: Directeur IGBMC <directeur.igbmc(a)igbmc.fr> > Subject: IGBMC call for Group Leader positions > Date: April 26, 2016 at 7:53:10 AM PDT > To: Undisclosed recipients:; > > > Dear Colleagues, > > The IGBMC is currently seeking outstanding scientists to take-up group leader positions within its Departements of Functional Genomics, Development and Stem Cells, and Integrated Structural Biology. Our attractive new call has just been launched and will be opened until July 30th 2016 (see attached advertisement). > > We would be grateful if you could post the attached poster to your notice board and disseminate the information to your organization/network and to people who might be interested. > > Many thanks in advance. > > With best regards, > > > Dr. Bertrand SERAPHIN > IGBMC Director > > > //\//\//\//\//\//\//\//\//\//\//\//\/ > > Bertrand Séraphin > > IGBMC > CNRS UMR 7104/INSERM U964/UDS > 1 Rue Laurent Fries > BP 10142 > 67404 Illkirch CEDEX > France > > Tel +33 (0)3 88 65 32 16 > Fax +33 (0)3 88 65 32 03 > > //\//\//\//\//\//\//\//\//\//\//\//\/ >

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[Compbio-allhands] Fwd: Antibody & Protein Engineering positions at Bayer - San Francisco
by Andrej Sali 25 Apr '16

25 Apr '16

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Associate Dean for Research, School of Pharmacy Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2552, Byers Hall Room 503B 1700 4th Street, San Francisco, CA 94143, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Administrative Assistant: Steve Ha, assistant(a)salilab.org <mailto:assistant@salilab.org>, Tel +1 (415) 514-4228, 502-8084 Email sali(a)salilab.org <mailto:sali@salilab.org>; Web http://salilab.org <http://salilab.org/> > Begin forwarded message: > > From: Shaun Lippow <slippow(a)gmail.com> > Subject: Antibody & Protein Engineering positions at Bayer - San Francisco > Date: April 25, 2016 at 1:09:10 PM PDT > To: Shaun Lippow <shaun.lippow(a)bayer.com> > > Hi all, > > Apologies for the mass email, but I'd like to get your help to distribute two great positions now open in my group. Please forward (or apply!). Applications should go through Bayer's website but recommendations direct to me are welcome and I'll try to expedite. Thanks! > > Position #1: Technical Staff Research Scientist - Antibody and Protein Engineering > Group/Department: Protein Platform Technologies group, in the Lead Discovery department > Company/Location: Bayer, US Innovation Center, Mission Bay, San Francisco > Primary Responsibilities: (1) Support antibody lead discovery, set strategies, manage projects; (2) Develop novel antibody technologies. See attached Job Description for more info > Minimum Experience: PhD with 4+ years relevant experience or equivalent -- but stellar new PhDs welcome to apply and position level will be adjusted accordingly > Start Date: ASAP > To Apply: www.career.bayer.us <http://www.career.bayer.us/> reference code 0000162405 (link here <https://career.bayer.us/job/Technical-Staff-Research-Scientist-Antibody-and…>) > > Position #2: Industrial Post Doc - Antibody and Protein Engineering > Group/Department: Protein Platform Technologies group, in the Lead Discovery department > Company/Location: Bayer, US Innovation Center, Mission Bay, San Francisco > Primary Responsibility: Develop novel protein and antibody technologies. See attached Job Description for more info > Minimum Experience: PhD or equivalent > Start Date: ASAP > To Apply: www.career.bayer.us <http://www.career.bayer.us/> reference code 0000162426 (link here <https://career.bayer.us/job/Industrial-Post-Doc-Ab-Protein-Engineer--000016…>) > > Best regards, > Shaun >

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[Compbio-allhands] 4/28/16 Seminar with Debbie Nickerson
by Flowers, Nicole 22 Apr '16

22 Apr '16

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 (Please note: A lack of attendance in S-161 within the first 10 minutes of the start time will result in a cancellation of the simulcast.) Debbie Nickerson University of Washington Lessons learned from scaling the analysis of Mendelian conditions April 28, 2016 T. Friedrich, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: opening in Computational Proteing Engineering at Illumina
by Jacobson, Matthew 21 Apr '16

21 Apr '16

-- Matt Sent from my iPhone Begin forwarded message: From: "Peisajovich, Sergio" <speisajovich(a)illumina.com<mailto:speisajovich@illumina.com>> Date: April 21, 2016 at 11:26:08 AM PDT To: "matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>" <matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>> Subject: opening in Computational Proteing Engineering at Illumina Dear Matt, I am a former postdoc from Wendell’s lab who is now working in Protein Engineering at Illumina. I am contacting you regarding an opening for a computational protein scientist in our Protein Engineering group, based in San Diego. I am attaching the job description here, I was hoping you could circulate this among postdocs or grad students in your lab that you believe are close to move on with their careers. If anyone is interested, please forward them my contact info, they can reach out to me directly. Please let me know if you have any questions or need more information. Thanks so much for your help on this. Cheers sergio Sergio Peisajovich, Ph.D. Associate Director, Scientific Research Illumina, Inc Tel:(858) 255-5451 speisajovich(a)illumina.com<mailto:speisajovich@illumina.com> www.illumina.com<http://www.illumina.com/>

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[Compbio-allhands] Fwd: opening in Computational Proten Engineering at Illumina
by Andrej Sali 21 Apr '16

21 Apr '16

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Associate Dean for Research, School of Pharmacy Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2552, Byers Hall Room 503B 1700 4th Street, San Francisco, CA 94143, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Administrative Assistant: Steve Ha, assistant(a)salilab.org, Tel +1 (415) 514-4228, 502-8084 Email sali(a)salilab.org; Web http://salilab.org > Begin forwarded message: > > From: "Peisajovich, Sergio" <speisajovich(a)illumina.com> > Subject: opening in Computational Proten Engineering at Illumina > Date: April 21, 2016 at 11:16:42 AM PDT > To: "sali(a)salilab.org" <sali(a)salilab.org> > > Dear Andrej, > > I am a former postdoc from Wendell’s lab who is now working in protein engineering at Illumina. > > I am contacting you regarding an opening for a computational protein scientist in our Protein Engineering group at Illumina, based in San Diego. > > I am attaching the job description here, I was hoping you could circulate this among postdocs or grad students in your lab that you believe are close to move on with their careers. If anyone is interested, please forward them my contact info, they can reach out to me directly. > > Please let me know if you have any questions or need more information. > > Thanks so much for your help on this, > > Best > > sergio > Sergio Peisajovich, Ph.D. > Associate Director, Scientific Research > Illumina, Inc > Tel:(858) 255-5451 > speisajovich(a)illumina.com <mailto:speisajovich@illumina.com> > www.illumina.com <http://www.illumina.com/> >

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[Compbio-allhands] Fwd: Employment opportunities in computational protein modeling for students and postdocs
by Andrej Sali 14 Apr '16

14 Apr '16

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Associate Dean for Research, School of Pharmacy Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2552, Byers Hall Room 503B 1700 4th Street, San Francisco, CA 94143, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Administrative Assistant: Steve Ha, assistant(a)salilab.org <mailto:assistant@salilab.org>, Tel +1 (415) 514-4228, 502-8084 Email sali(a)salilab.org <mailto:sali@salilab.org>; Web http://salilab.org <http://salilab.org/> > Begin forwarded message: > > From: Greg Lakatos <glakatos(a)zymeworks.com> > Subject: Fwd: Employment opportunities in computational protein modeling for students and postdocs > Date: April 14, 2016 at 11:00:48 AM PDT > To: sali(a)salilab.org > > Dear Professor Sali, > > I apologize for contacting you again, however the job postings didn't make it through with my previous email. > > Thank you again, > > Greg > > > From: Greg Lakatos <glakatos(a)zymeworks.com> > To: <sali(a)salilab.org> > Sent: 4/14/2016 10:54 AM > Subject: Employment opportunities in computational protein modeling for students and postdocs > > Dear Professor Sali, > > I am writing on behalf of Zymeworks Inc., a computational biotechnology company located in Vancouver, Canada. Zymeworks has developed a set of computational protein modeling tools that have been successfully used to design a novel antibody-based drug platform. As part of our on-going efforts to improve our protein modeling capabilities, we are currently recruiting scientists to join our simulation and modeling team. I have attached copies of our current job postings, and I would be grateful if you could forward these postings to members of your group, or any other students or postdocs who may be interested. More information about Zymeworks is available at our website (www.zymeworks.com <http://www.zymeworks.com/>). I am also happy to answer questions about our openings, and I can be reached at glakatos(a)zymeworks.com <mailto:glakatos@zymeworks.com> > > Thank you for your time and assistance. > > Sincerely, > > Greg Lakatos > Principal Scientist and Simulations Team Lead > Zymeworks Inc. > > > > Notice of Confidentiality: The information transmitted is intended only for the > person or entity to which it is addressed and may contain confidential and/or > privileged material. Any review, re-transmission, dissemination or other use of > or taking of any action in reliance upon this information by persons or entities > other than the intended recipient is prohibited. If you received this in error > please contact the sender immediately by return electronic transmission and then > immediately delete this transmission including all attachments without copying, > distributing or disclosing the same.

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[Compbio-allhands] Fwd: Employment opportunities in computational protein modeling for students and postdocs
by Jacobson, Matthew 14 Apr '16

14 Apr '16

- Matt Begin forwarded message: From: Greg Lakatos <glakatos(a)zymeworks.com<mailto:glakatos@zymeworks.com>> Subject: Employment opportunities in computational protein modeling for students and postdocs Date: April 14, 2016 at 10:49:03 AM PDT To: <matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>> Dear Professor Jacobson, I am writing on behalf of Zymeworks Inc., a computational biotechnology company located in Vancouver, Canada. Zymeworks has developed a set of computational protein modeling tools that have been successfully used to design a novel antibody-based drug platform. As part of our on-going efforts to improve our modeling tools, we are currently recruiting scientists to join our simulation and modeling team. I have attached copies of our current job postings and I would be grateful if you could forward these postings to members of your group, or any other students or postdocs who may be interested. More information about Zymeworks is available at our website (www.zymeworks.com<http://www.zymeworks.com>). I am also happy to answer questions about our openings, and I can be reached at glakatos(a)zymeworks.com<mailto:glakatos@zymeworks.com> Thank you for your time and assistance. Sincerely, Greg Lakatos Principal Scientist and Simulations Team Lead Zymeworks Inc. Notice of Confidentiality: The information transmitted is intended only for the person or entity to which it is addressed and may contain confidential and/or privileged material. Any review, re-transmission, dissemination or other use of or taking of any action in reliance upon this information by persons or entities other than the intended recipient is prohibited. If you received this in error please contact the sender immediately by return electronic transmission and then immediately delete this transmission including all attachments without copying, distributing or disclosing the same.

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[Compbio-allhands] Fwd: Computational Biology Position
by Brian Shoichet 08 Apr '16

08 Apr '16

FYI Brian Shoichet, Professor Dept. of Pharmaceutical Chemistry, UCSF by courtesy: Faculty of Pharmacy & OICR, UofT sent from my phone. ---------- Forwarded message ---------- From: "Susie Stephens" <susie.stephens(a)gmail.com> Date: Apr 9, 2016 1:33 AM Subject: Computational Biology Position To: <bshoichet(a)gmail.com> Cc: Hi Brian, How are you doing? Are you aware of any computational biologists with 2-5 years of experience who would be interested in working at Pfizer with a focus on target discovery and validation in oncology and immuno-oncology? If you know of someone it would be great if you could point them in my direction, or have them apply for the job at https://globaljobs.pfizer.com/pages/jobs.aspx using Job Id 1010987. Thanks for you rhelp. Best, Susie

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[Compbio-allhands] 4/14/16 Seminar with Ian Wilson- NOTE LOCATION
by Flowers, Nicole 08 Apr '16

08 Apr '16

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall N114 NO SIMULCAST. URL for live capture will be sent out on 4/13/16. HARC Center Speaker: Ian Wilson Scripps Broad neutralization of viral pathogens April 14, 2016 B. Stroud, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: job opportunity in Seattle area
by Jacobson, Matthew 05 Apr '16

05 Apr '16

- Matt Begin forwarded message: From: Jaline Gerardin <gerardin(a)gmail.com<mailto:gerardin@gmail.com>> Subject: job opportunity in Seattle area Date: April 5, 2016 at 9:17:13 PM PDT To: Matthew Jacobson <matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>> Hi Matt, We have an interesting position open at the interface of software and research. Could you forward to compbio-allhands? thanks, Jaline -------------------------------------------------------------------------------------------------- Open position at Institute for Disease Modeling, Bellevue WA: The IDM Research Software Engineer will work on an elite team of software developers along with testers and researchers at IDM tasked with developing software tools for all stages of the disease modeling pipeline. This pipeline includes designing and querying large data for climate, demographic, and transportation data for input to the disease modeling software; specifying and commissioning simulation jobs on a high performance computing cluster; detailed simulation of disease transmission dynamics; data reduction and analysis of simulation output; and workstation and web based data visualization tools. This position focuses on building tools and applications to support the different disease teams. Full job posting: http://iv.avature.net/careers/JobDetail/Bellevue-Wa-Washington-United-State… Institute for Disease Modeling: www.idmod.org<http://www.idmod.org/>

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[Compbio-allhands] Fwd: Hands-On Computer Aided Drug Design Workshop @ UCSF, San Francisco - Friday Apr. 15
by Jacobson, Matthew 05 Apr '16

05 Apr '16

I don’t recall whether this has been distributed on this list previously If you want to learn MOE ... - Matt Begin forwarded message: From: Audrey Bonin <abonin(a)chemcomp.com<mailto:abonin@chemcomp.com>> Subject: Hands-On Computer Aided Drug Design Workshop @ UCSF, San Francisco - Friday Apr. 15 Date: April 5, 2016 at 11:33:07 AM PDT To: Audrey Bonin <abonin(a)chemcomp.com<mailto:abonin@chemcomp.com>> Dear Friends and Colleagues , I would like to invite you to our hands-on computer-aided drug design workshops which will take place at UCSF - April 15th, 2016. The workshops are open to the public and all interested parties are welcome to attend - no prior software experience is required to participate. Please find course information and related details below. The workshop is free but pre-registration is required since places are limited, to register please visit : http://www.chemcomp.com/Workshops-North_America.htm Lunch, and refreshments will be provided during the workshops, please bring your own laptop to the workshop*. Date: CCG Workshops - Friday April 15, 2016 Location: UCSF - Smith Cardiovascular Research Bldg (CVRI), 555 Mission Bay Blvd S., first floor seminar room. ================================================================ 08:30-09:00 Morning break* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -- - - - 09:00-12:00 Structure-Based Drug Design and Ligand Modification Molecular Surfaces and Maps / Ligand Interactions / Conformational Searching / Ligand Optimization / Ligand Selectivity / Protein Alignments and Superposition - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -- - - - 12:00-13:00 Lunch* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -- - - - 13:00-17:00 Antibody Modeling and Protein Engineering in MOE Protein-Protein Interactions / Protein Properties / Developability / Hot Spot Analysis / Antibody Modeling / Molecular Surfaces / Protein-protein docking ================================================================ *Continental breakfast and lunch will be provided. ================================================================ -- Course title: Structure-Based Drug Design and Ligand Modification Course description: The course covers MOE applications for interactive structure based design. Examples include active site visualization, protein-ligand contact analysis and ligand modification/optimization in the receptor pocket. Conformational searching and analysis of the ligand to assess ligand flexibility will be discussed. A protocol for aligning and superposing protein complexes in the context of protein selectivity will be studied. Course title: Antibody Modeling and Protein Engineering in MOE Course description: The course covers approaches for structure-based biologics design and includes protein-protein interactions analysis, in silico protein engineering, affinity modeling and antibody homology modeling. The interaction of a co-crystallized antibody-antigen complex will be evaluated by generating and examining the molecular surface topology and visualizing protein-protein interactions in 3D and 2D. The application of protein engineering tools for homology modeling and conducting property optimization of an antibody-antigen complex in the context developability will be studied.All the steps necessary for producing and assessing antibody homology models will be described. Methods for evaluating the structure of protein and antibody models will be discussed. *If you don't have access to MOE, please communicate with me prior to the workshop, I will set up a demo key for you so you can follow along on your personal laptop. Regards, Audrey Bonin, M. Sc. Chemistry Academic Services Manager Chemical Computing Group T. +1 514 393-1055<tel:%2B1%20514%20393-1055> abonin(a)chemcomp.com<mailto:abonin@chemcomp.com> | www.chemcomp.com<http://www.chemcomp.com/> Follow us on Twitter! @CCG_MOE

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[Compbio-allhands] Fwd: Editorial
by Brian Shoichet 03 Apr '16

03 Apr '16

---------- Forwarded message ---------- From: Patrick Walters <wpwalters(a)gmail.com> Date: Sun, Apr 3, 2016 at 8:29 AM Subject: Re: Editorial To: Brian Shoichet <shoichet(a)cgl.ucsf.edu> W e're looking for someone with MD expertise (see below). I think this could be a huge opportunity for someone of that phenotype. Please let me know if you know of anyone who would be interested in joining our band. Best, Pat ------- Relay Therapeutics is seeking a highly motivated computational chemist to join our rapidly growing team. This individual will utilize cutting edge computational methods, in conjunction with information generated by a variety of biophysical techniques, to design novel therapeutics targeted to allosteric sites. In this role, the ideal candidate will work as part of a multidisciplinary team to integrate computational and experimental insights and drive drug discovery. *Responsibilities* - Carry out analyses that combine computational and experimental data to develop testable hypotheses that drive drug discovery programs - Collaborate with scientists throughout the company to maximize the impact of computational efforts on projects - Work collaboratively with external computational groups to develop and refine new computational methods - Ensure effective communication of computational results across departments and teams - Develop new approaches to streamline and enhance computational workflows *Preferred Qualifications* - Ph.D. in Computational Chemistry, Computational Biology, Biophysics, or a related discipline - 1 to 5 years of industrial or postdoctoral experience - Demonstrated expertise applying wide variety of modern computational chemistry methods - Demonstrated expertise in structure-based drug design - In depth knowledge of molecular dynamics and its application to drug discovery - Facility working in a Unix/Linux environment - Ability to program in at least 1 modern scripting language (e.g. Python) - Strong interpersonal and communications skills - Ability to conduct independent research >>>> >>>> -- Brian Shoichet, Professor http://bkslab.org/ <http://www.uoft.bkslab.org/> 415-514-4126 University of California, San Francisco Dept. of Pharmaceutical Chemistry By Courtesy: University of Toronto, Faculty of Pharmacy Ontario Institute for Cancer Research

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[Compbio-allhands] 4/7/16 Seminar with Ronen Marmorstein
by Flowers, Nicole 01 Apr '16

01 Apr '16

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 (Please note: A lack of attendance in S-161 within the first 10 minutes of the start time will result in a cancellation of the simulcast.) Ronen Marmorstein University of Pennsylvania Molecular mechanisms of post-translational and co-translational protein acetylation April 7, 2016 D. Fujimori, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 Phone: (415) 502-6518 Fax: (415) 514-1546

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