October 2018 - compbio-allhands@cgl.ucsf.edu

[Compbio-allhands] Fwd: AbbVie Postdoctoral Program
by Michael Keiser 22 Oct '18

22 Oct '18

---------- Forwarded message --------- From: Korst, Dorth M <Dorth.Korst(a)abbvie.com> Date: Fri, Oct 19, 2018 at 4:02 PM Subject: AbbVie Postdoctoral Program To: keiser(a)keiserlab.org <keiser(a)keiserlab.org> Dr. Keiser, Dr. Scott Mittelstadt, Director of Pharmaceutical Development/AbbVie Development Sciences indicated that he had met you recently at a conference and that you had mentioned that you had two graduate students finishing up their graduate work. If my timing serves me well, I would like to present an opportunity for an industry Postdoc positon within our Development Biological Sciences group. I have attached a brochure which provides an overview of our program, now in its third year, as well as, a cover note from the hiring manager, Dr. Mohan Rao, and a more detailed position description. If there might be an interest, could you direct your students to me and I would be able to elaborate a bit further on AbbVie and its excitement and commitment to this program. *Cheers /TSChuss* *Dorth Korst* Postdoctoral Program Manager [image: cid:image005.png@01CFC6D1.D5522A30] *AbbVie* V32W AP34 – SW 2nd Floor 1 North Waukegan Road North Chicago, IL 60064 *OFFICE * +1 847-938-3599 *CELL:* +1 224 214-2093 *FAX * +1 847-937-4464 *EMAIL * dorth.korst(a)abbvie.com *AbbVie Fact Book <http://www.flipsnack.com/FDFAE758B7A/explore-abbvie-share-the-passion.html>* *abbvie.com <http://www.abbvie.com/> | Follow us: * *[image: twitter]* <http://www.twitter.com/abbvie> *[image: facebook]* <http://www.facebook.com/abbviecareers> *[image: linkedin]* <http://www.linkedin.com/company/abbvie> *[image: youtube]* <https://www.youtube.com/user/AbbVie> PEOPLE. PASSION. POSSIBILITIES. -- Michael J Keiser, PhD Assistant Professor, UCSF Dept Pharmaceutical Chemistry Dept Bioengineering & Therapeutic Sciences Bakar Computational Health Sciences Institute Institute for Neurodegenerative Diseases p/1-415-886-7651 keiserlab.org <http://www.keiserlab.org> calendly.com/mjke

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[Compbio-allhands] 10/25/18 Seminar with Youxing Jiang
by Flowers, Nicole 18 Oct '18

18 Oct '18

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Livestream: http://tiny.ucsf.edu/1nDzjE Youxing Jiang UT Southwestern Structural Insights into the Selectivity and Gating of Organellar Two-pore Channels October 25, 2018 B. Stroud, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. -- Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 P: 415.502.6518

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[Compbio-allhands] 10/18/18 Seminar with Yuan Gao
by Flowers, Nicole 12 Oct '18

12 Oct '18

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Livestream: http://tiny.ucsf.edu/1nDzjE Yuan Gao Clements Lecture Structural studies on ligand and lipid modulation of the capsaicin receptor, TRPV1 October 18, 2018 Y. Cheng & D. Julius, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. -- Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 P: 415.502.6518

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[Compbio-allhands] Fwd: Open PostDoc Position at the Structural Genomics Group of CNAG-CRG
by Andrej Sali 10 Oct '18

10 Oct '18

Sent from my iPhone Begin forwarded message: > From: "Marc A. Marti-Renom" <martirenom(a)cnag.crg.eu> > Date: October 10, 2018 at 2:48:03 AM PDT > To: "Marc A. Marti-Renom" <martirenom(a)cnag.crg.eu> > Cc: Tomas Marques <tomas.marques(a)upf.edu>, Marcelo Nollmann <marcnol(a)gmail.com>, Fred Davis <fred(a)salilab.org>, Rob Russell <russell(a)embl.de>, "imartins(a)clinic.ub.es" <imartins(a)clinic.ub.es>, "Francesc Aviles" <FrancescXavier.Aviles(a)uab.es>, Genevieve Almouzni <Genevieve.almouzni(a)curie.fr>, Eswar Narayanan <eswar.n(a)gmail.com>, Ana Pombo <Ana.Pombo(a)mdc-berlin.de>, Joaquin Dopazo <joaquin.dopazo(a)gmail.com>, Francisco Paco Real <freal(a)cnio.es>, Tom Ferrin <tef(a)cgl.ucsf.edu>, "Christos Ouzounis" <ouzounis(a)certh.gr>, Santiago Elena Fito <sfelena(a)ibmcp.upv.es>, Edith Heard <edith.heard(a)curie.fr>, Ana Losada <alosada(a)cnio.es>, "David Dufour UB" <david.dufour.rausell(a)gmail.com>, Joe DeRisi <joe(a)derisilab.ucsf.edu>, Emidio Capriotti <emidio.capriotti(a)gmail.com>, Victor Corces <vgcorces(a)gmail.com>, Wendy Bickmore <Wendy.Bickmore(a)igmm.ed.ac.uk>, Daniel Jost <daniel.jost(a)imag.fr>, "Attila Nemeth" <attila.nemeth(a)vkl.uni-regensburg.de>, Ferran Azorin <fambmc(a)ibmb.csic.es>, Andras Fiser <andras(a)fiserlab.org>, Bosi Stefania <stefania.bosi(a)gmail.com>, George Church <gc(a)harvard.edu>, Francesc Canals <fcanals(a)vhebron.net>, Olivier Neyrolles <olivier.neyrolles(a)gmail.com>, Amadeo Caflisch <caflisch(a)bioc.unizh.ch>, Jim Hughes <jim.hughes(a)imm.ox.ac.uk>, Wouter de Laat <w.delaat(a)hubrecht.eu>, "John Overington" <joverington(a)mac.com>, Maya Topf <mayatopf(a)gmail.com>, "David Jones" <dtj(a)cs.ucl.ac.uk>, David Posada <dposada(a)uvigo.es>, Soya Shinkai <soya.shinkai(a)riken.jp>, Juan Antonio Rodriguez Perez <juan.rodriguez(a)cnag.crg.eu>, Agusti Lledos <agusti(a)klingon.uab.es>, "Peter Fraser" <pfraser(a)bio.fsu.edu>, Thomas Blundell <tom(a)cryst.bioc.cam.ac.uk>, Modesto Orozco <modesto(a)mmb.pcb.ub.es>, Alfonso Valencia <alfonso.valencia(a)bsc.es>, David Reverter <dreverter(a)yahoo.es>, "M. S. Madhusudhan" <madhusudhan(a)iiserpune.ac.in>, Francisco Paco Enguita <fenguita(a)medicina.ulisboa.pt>, José Luís Gómez-Skarmeta <jlgomska(a)upo.es>, "Gerd Blobel" <blobel(a)email.chop.edu>, Damien Devos <damien.devos(a)gmail.com>, Patsy Babbitt <babbitt(a)cgl.ucsf.edu>, Javier Santoyo <jsantoyo(a)cipf.es>, Adam Godzik <adam(a)ljcrf.edu>, Silvio Tosatto <silvio(a)cribi.unipd.it>, Antonio Barbadilla Prados <Antonio.Barbadilla(a)uab.es>, Kerstin Bystricky <kerstin(a)biotoul.fr>, Gicquel Brigitte <bgicquel(a)pasteur.fr>, Jerónimo Bravo <jbravo(a)ibv.csic.es>, Dmitry Korkin <korkin(a)salilab.org>, Jordi Mestres <jmestres(a)imim.es>, Roderic Guigo Serra <roderic.guigo(a)crg.eu>, Howard Chang <howchang(a)stanford.edu>, "F. Xavier de la Cruz" <xdmcri(a)ibmb.csic.es>, Matt Jacobson <matt(a)cgl.ucsf.edu>, "Leonardo Pardo" <leonardo.pardo(a)uab.es>, Karsten Rippe <Karsten.Rippe(a)bioquant.uni-heidelberg.de>, Stefan Mundlos <mundlos(a)molgen.mpg.de>, Salvador Aznar-Benitah <salvador.aznar-benitah(a)irbbarcelona.org>, Frank Grosveld <f.grosveld(a)erasmusmc.nl>, David Baker <dabaker(a)u.washington.edu>, "Francisco Pancho Melo-Ledermann" <pancho.melo(a)gmail.com>, Francisco Martinez-Jiménez <franchesko01(a)gmail.com>, Isidre Gibert <Isidre.Gibert(a)uab.es>, Ismael Mingarro <mingarro(a)uv.es>, "Henk Stunnenberg" <H.Stunnenberg(a)ncmls.ru.nl>, Emanuele Paci <e.paci(a)leeds.ac.uk>, F. Xavier Gomis-Rüth <fxgr(a)ibmb.csic.es>, "Jaume Bertranpetit" <jaume.bertranpetit(a)upf.edu>, Bosco Ho <bosco(a)maxwell.ucsf.edu>, Torsten Schwede <Torsten.Schwede(a)unibas.ch>, "Joan Seoane" <jseoane(a)vhio.net>, Stephen Taylor <stephen.taylor(a)imm.ox.ac.uk>, "Phil Bourne" <bourne(a)sdsc.edu>, William Stafford Noble <william-noble(a)u.washington.edu>, Jordi Quintana <jquintana(a)pcb.ub.es>, Josep Samitier Martí <jsamitier(a)ibecbarcelona.eu>, "Steven Brenner" <brenner(a)compbio.berkeley.edu>, Ana Conesa <aconesa(a)cipf.es>, "Fatima Al-Shahrour" <falshahrour(a)cnio.es>, "Tobias A. Knoch" <t.a.knoch(a)erasmusmc.nl>, Ugo Bastolla <ubastolla(a)cbm.uam.es>, "Luis Serrano Pubul" <luis.serrano(a)crg.eu>, Fyodor Kondrashov <fkondrashov(a)gmail.com>, "Ben Lehner Gmail" <lehner.ben(a)gmail.com>, Franca Fraternali <ffranca(a)nimr.mrc.ac.uk>, Leonid Mirny <leonid(a)mit.edu>, Mark Gerstein <Mark.Gerstein(a)yale.edu>, Cristina Marino-Buslje <cmb(a)leloir.org.ar>, "Cedric Govaerts" <cedric(a)cmpharm.ucsf.edu>, Lluís Ribas de Pouplana <lluis.ribas(a)irbbarcelona.org>, Casadio Rita <casadio(a)biocomp.unibo.it>, Tom Misteli <mistelit(a)mail.nih.gov>, Cedric Notredame <Cedric.Notredame(a)crg.eu>, Andrej Sali <sali(a)salilab.org>, Boris Turk <boris.turk(a)ijs.si>, Rosa Angelo <anrosa76(a)gmail.com>, "Mario Nicodemi" <nicodem(a)na.infn.it>, Job Dekker <jobdekker1(a)gmail.com>, "Baldomero Oliva" <baldo.oliva(a)gmail.com>, Giacomo Cavalli <giacomo.cavalli(a)igh.cnrs.fr>, Frank Alber <alber(a)usc.edu>, Chris Burge <chris(a)CCR-081.mit.edu>, Amos Tanay <amos.tanay(a)weizmann.ac.il>, "Guillaume Bourque" <guil.bourque(a)mcgill.ca>, Xavier Daura <xavier.daura(a)uab.cat>, "Xavier Deupi" <xdeupi(a)gmail.com>, Arcadi Navarro <arcadi.navarro(a)upf.edu>, "Toni Gabaldon Estevan" <toni.gabaldon(a)crg.eu> > Subject: Open PostDoc Position at the Structural Genomics Group of CNAG-CRG > > Dear Friends and Colleagues, > > Sorry for the mass posting. > > Could you please forward that email to whom you believe could be interested in a Postdoc position for 2 years in Barcelona to work either in the bench or the computer in 3DGenomics/4DNucleome projects. > > More details here: http://www.cnag.cat/jobs/postdoctoral-fellow-structural-genomics-group > > Thanks in advance, > Marc > ... > Marc A. Marti-Renom, ICREA Research Professor > Structural Genomics Group Leader > Centre Nacional d’Anàlisi Genòmica - Centre de Regulació Genòmica (CNAG-CRG) > The Barcelona Institute of Science and Technology (BIST) > Parc Científic de Barcelona – Torre I (10th floor) > Baldiri Reixac, 4, 08028 Barcelona > Tel +34 9340 33743 > Email: martirenom(a)cnag.crg.eu > Web: http://marciuslab.org · http://cnag.crg.eu · http://crg.cat > > *** Consider the environment. Print responsibly. *** >

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[Compbio-allhands] Fwd: 4-year PhD Theoretical Systems Biology & Bioinformatics @ Imperial College London Oct 2018
by Andrej Sali 08 Oct '18

08 Oct '18

> Begin forwarded message: > > From: "Sternberg, Michael J E" <m.sternberg(a)imperial.ac.uk> > Subject: FW: 4-year PhD Theoretical Systems Biology & Bioinformatics @ Imperial College London Oct 2018 > Date: October 8, 2018 at 5:37:53 AM PDT > > > > Dear colleague > > I would be grateful if you could forward this exciting opportunity to your undergraduates > > If possible, please could put the poster - that would be great. > > Thanks > > Mike Sternberg > Imperial College London > > A 4-year PhD in Theoretical Systems Biology and Bioinformatics at Imperial College London > The opportunity > This 4-year PhD programme <https://www.findaphd.com/common/clickCount.aspx?theid=1005&type=185&url=htt…>, supported by The Wellcome Trust, will provide an exciting training opportunity to acquire multidisciplinary skills to develop and then apply modelling to biological and clinical problems at the molecular and cellular levels. The programme aims to facilitate discipline hopping into this area and we welcome undergraduates from biological and medical sciences, physical sciences, mathematics, statistics, engineering and computing. The course will enable you, whatever your first degree, to acquire the breadth of skills to undertake stimulating research using theoretical systems biology and bioinformatics to advance biological and clinical research. As a member of the programme you will join a large community at Imperial applying modelling to study biological and biomedical problems. > > > > The training programme > You will begin your studies by being registered on our highly-successful, year-long MSc in Bioinformatics and Theoretical Systems Biology. This course starts with training and you will acquire core biological, computational and mathematics skills and have lectures in bioinformatics and theoretical systems biology. This is followed by three different rotation projects which enable you to discover and experience different modelling methodologies and experimental laboratory environments. During the first year you will benefit from working with many other students studying for this MSc. The subsequent three PhD years will involve research developing novel theoretical methodologies and applying them to solve biological and biomedical problems. You will have two supervisors throughout your PhD – one theoretical and one experimental – to provide multidisciplinary training. You will have an opportunity to spend time with the experimental group so you understand the data-generating protocols and you can undertake laboratory work to test hypotheses generated from your modelling. We will offer you a wide range of research topics for your PhD as Imperial College has many vibrant research groups working in theoretical systems biology and bioinformatics and their application to bioscience and biomedical problems. > > Application Procedure > The next 4-year programme starts in October 2018. There are 5 fully funded places (stipend, fees and generous research support including travel) for home/EU students and there is one scholarship to provide the additional fees required for an exceptional overseas student. The stipend for 2017 will start at no less than £22,278 in year one, rising to at least £26,839 in year four. Deadline for receipt of applications is 23:00 GMT on Monday 4 December 2017. For further details and application procedure: Google “Wellcome Bioinformatics Imperial” > or go to http://www.imperial.ac.uk/wellcome-bioinformatics-phd/ <http://www.imperial.ac.uk/wellcome-bioinformatics-phd/>

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[Compbio-allhands] Fwd: Postdoc Positions Available
by Andrej Sali 04 Oct '18

04 Oct '18

Begin forwarded message: > > From: "Gregory A. Voth" <gavoth(a)uchicago.edu> > Subject: Postdoc Positions Available > Date: October 4, 2018 at 12:31:49 PM PDT > To: "Gregory A. Voth" <gavoth(a)uchicago.edu> > > > Dear Colleague, > > There is the possibility of one or more postdoc positions in my group, subject to the qualifications and experience of the applicants, as well as the final availability of funding. > > The postdoc position(s) involve the development and application of simulation methods for complex membranes and proteins/peptides interacting with them, as well as multi-protein complexes, at both the all-atom and coarse-grained levels. Experience with MD simulation is required, and preferably (but not required) also with free energy sampling techniques such as umbrella sampling, replica exchange, and metadynamics. > > Please ask any interested student in your group to contact me by email. > > Best wishes, > Greg > > PS-I apologize if you get this email more than once. > > _____________________________________________________________________ > > Gregory A. Voth, Ph.D. > Haig P. Papazian Distinguished Service Professor > Department of Chemistry, James Franck Institute, and Institute for Biophysical Dynamics > > Department of Chemistry > The University of Chicago > 5735 S. Ellis Avenue > Chicago, Illinois 60637 > Phone: 773-702-9092 <tel:773-702-9092> > Fax: 773-795-9106 <tel:773-795-9106> > Administrative Assistant: 773-702-9096 <tel:773-702-9096> > Email: gavoth(a)uchicago.edu <mailto:gavoth@uchicago.edu> > Group Web Site: vothgroup.uchicago.edu <http://vothgroup.uchicago.edu/> > ____________________________________________________________________

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[Compbio-allhands] 10/11/18 Seminar with Rong Li
by Flowers, Nicole 04 Oct '18

04 Oct '18

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Livestream: http://tiny.ucsf.edu/1nDzjE [/var/folders/7s/ln22sh2n38z5pq0vj15rm0tm0000gq/T/com.microsoft.Outlook/WebArchiveCopyPasteTempFiles/cidimage001.png(a)01D3C747.62849D60] Co-Sponsored by The Gladstone Center for Cell Circuitry Rong Li Johns Hopkins University Cellular asymmetry in aging and proteostasis October 11, 2018 L. Wu, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. -- Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 P: 415.502.6518

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[Compbio-allhands] 10/4/18 Seminar with Tracy Johnson
by Flowers, Nicole 04 Oct '18

04 Oct '18

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Livestream: http://tiny.ucsf.edu/1nDzjE Tracy Johnson UCLA RNA Processing, Chromatin Modification, and the Coordinated Control of Gene Expression October 4, 2018 S. Floor, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. -- Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94143 Phone: (415) 502-6518 Fax: (415) 514-1546

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compbio-allhands October 2018