- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] eMolecules presentation: Fri Jan 20th, 11 to 12 noon (tomorrow)
by John Irwin 19 Jan '12

19 Jan '12

Dear Allhands eMolecules, a small molecule procurement company, will make a short presentation and take Q&A tomorrow for one hour starting at 11am (11:10am) in BH513. RSVP to me only jji(a)cgl.ucsf.edu so I can get an approximate head count. Please forward to anyone you think might be interested. John

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[Compbio-allhands] 1/16/12 Seminar with Kristala Jones Prather
by Nicole Takesono Flowers 18 Jan '12

18 Jan '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Kristala Jones Prather MIT Parts, Devices, and Chassis in Support of Metabolic Engineering January 19, 2012 D. Booth, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] QBC Journal Club, Tuesday, January 24- 10:45AM, GH Aud
by Nicole Takesono Flowers 18 Jan '12

18 Jan '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, January 24 10:45 am, GH Auditorium Megan Li, PSPG Therapeutic siRNA silencing in inflammatory monocytes in mice. Leuschner F et al. Nat Biotechnol. 2011; 29 (11): 1005-10 Patrick Harrigan, iPQB Predicting mutation outcome from early stochastic variation in genetic interactions partners. Burga, A. et al. Nature 2011; 480: 250-253. bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] QBC Journal Club, Tuesday, January 17- 10:45AM, GH Aud
by Nicole Takesono Flowers 11 Jan '12

11 Jan '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, January 17 10:45 am, GH Auditorium Benjamin Spangler, CCB Chemically Crosslinking the Active Site of O-GlcNAc transferase. A neutral diphosphate mimic crosslinks the active site of human O-GlcNAc transferase Jiang, et al. Nature Chem. Bio. Amy Chang, iPQB Electrical Spiking in Escherichia coli Probed with a Fluorescent Voltage-Indicating Protein Kralj et al. Science. July 15, 2011. bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Institute for Advanced Study Offers Summer Program
by Andrej Sali 09 Jan '12

09 Jan '12

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: Susan Higgins <shiggins(a)ias.edu> > Subject: Institute for Advanced Study Offers Summer Program > Date: January 9, 2012 10:38:49 AM PST > To: sali(a)SALILAB.ORG > > INSTITUTE FOR ADVANCED STUDY > SCHOOL OF NATURAL SCIENCES > PRINCETON, NEW JERSEY, USA > > Dear Colleague, > > From July 9-20, 2012, the Institute for Advanced Study will offer its annual Prospects in Theoretical Physics (PiTP) summer program on the Institute campus in Princeton, New Jersey, USA. > > The 2012 PiTP Program, "Computation and Biology," will explore, for the first time, a range of topics at the interface of theoretical computer science, statistical physics and quantitative biology. > > This program is intended for graduate students and postdoctoral scholars in all three fields of computer science, theoretical physics and quantitative biology. A list of topics to be covered, and the lecturers expected to speak on each topic, are noted below: > > - "Errors and codes": Måns Ehrenberg (Uppsala University) and Tsvi Tlusty (Institute for Advanced Study) > > - "Viruses and immunity": Guillaume Bonfante (Université de Nancy), Arup Chakraborty (Massachusetts Institute of Technology), and Arnold Levine (Institute for Advanced Study) > > - "Growth and form": Przemyslaw Prusinkiewicz (University of Calgary) and Enrico Coen (John Innes Centre, Norwich) > > - "Natural algorithms": Bernard Chazelle (Princeton University), Jean-Louis Deneubourg (Université Libre de Bruxelles), and Guy Theraulaz (Université Paul Sabatier, Toulouse) > > - "Learning & robotics": Hod Lipson (Cornell University), Dario Floreano (École Polytechnique Fédérale de Lausanne), and Michale Fee (Massachusetts Institute of Technology) > > Attached is a poster for the PiTP 2012 program, which we kindly ask you to please print and display as appropriate. Information about application procedures and a program schedule can be found on the PiTP website: www.ias.edu/pitp. > > We would be grateful if you would bring this program to the attention of students and postdocs in your department, as well as to the attention of colleagues in your department and elsewhere. In particular, we encourage the participation of women, minorities, and students from institutions with smaller programs in the areas of computer science, theoretical physics and quantitative biology. > > We hope that you will encourage any young researcher who would benefit from this kind of program to apply. > > Sincerely, > > Bernard Chazelle, Princeton University > David Huse, Princeton University > Stanislas Leibler, Institute for Advanced Study > > > > > >

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[Compbio-allhands] Fwd: Bioinformatics positions at Illumina in San Diego
by Jacobson, Matt 04 Jan '12

04 Jan '12

Begin forwarded message: From: Ilya Chorny <ichorny(a)gmail.com<mailto:ichorny@gmail.com>> Date: January 4, 2012 5:00:14 PM PST To: "Jacobson, Matt" <Matt.Jacobson(a)ucsf.edu<mailto:Matt.Jacobson@ucsf.edu>>, <babbitt(a)cgl.ucsf.edu<mailto:babbitt@cgl.ucsf.edu>>, Andrej Sali <sali(a)salilab.org<mailto:sali@salilab.org>>, Ken Dill <dill(a)laufercenter.org<mailto:dill@laufercenter.org>>, "Crawford, Douglas" <douglas.crawford(a)qb3.org<mailto:douglas.crawford@qb3.org>>, Robert Stroud <stroud(a)msg.ucsf.edu<mailto:stroud@msg.ucsf.edu>> Subject: Bioinformatics positions at Illumina in San Diego Hi All, Happy New Year!! We have a bioinformatics position open in our group in San Diego. Please pass this along to any interested parties. They can contact me if they would like to know more about the position or working at Illumina. https://www.illumina.apply2jobs.com/ProfExt/index.cfm?fuseaction=mExternal.… Thanks, Ilya -- Ilya Chorny Ph.D. Matthew P. Jacobson Professor, Department of Pharmaceutical Chemistry Department of Bioengineering and Therapeutic Sciences California Institute for Quantitative Biosciences Director, Graduate Group in Biophysics UCSF MC 2540 1700 4th St., Byers Hall, Room 408E San Francisco, CA 94158-2330 matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu> jacobsonlab.org<http://jacobsonlab.org>

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[Compbio-allhands] QBC Journal Club, Tuesday, January 3- 10:45AM, GH Aud
by Nicole Takesono Flowers 28 Dec '11

28 Dec '11

BMI ~ BP ~ CCB ~ PSPG Tuesday, January 3 10:45 am, GH Auditorium Katherine Aull, iPQB Dynamic Exchange at Regulatory Elements During Chromatin Remodeling Underlies Assisted Loading Mechanism Voss et al, Cell 146:4 544-554. 2011 Weihan Li, iPQB Growth Rate-Dependent Global Effects on Gene Expression in Bacteria Stefan Klumpp, Zhongge Zhang, and Terence Hwa, Cell 139, 1366-1375. 2009 bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Four tenure track faculty positions in high end RNA research available at University at Albany!---Rama
by Andrej Sali 20 Dec '11

20 Dec '11

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: Ramaswamy Sarma <rsarma(a)ALBANY.EDU> > Subject: Four tenure track faculty positions in high end RNA research available at University at Albany!---Rama > Date: December 19, 2011 10:12:58 PM PST > To: DNA-DYNAMICS(a)listserv.albany.edu > Reply-To: Ramaswamy Sarma <rsarma(a)ALBANY.EDU> > > My Dear Colleague: > > I could not be any more excited; we are indeed announcing the opening of FOUR tenure track faculty lines -three in the Chemistry Dept, and one in the Dept of Biological Sciences -- all with concentration in RNA chemistry and biology affiliated with the University at Albany's fast growing RNA Institute. > > http://www.albany.edu/rna/ > > The attached contains detailed descriptions of the positions open and how to apply. > > If you are a young RNA researcher looking for a starting faculty position in an urban University with great future, these openings are for you. > > You may know of some highly talented young professionals in RNA field, and if so, I will appreciate a great deal, if you will encourage them to apply. > > Within 2-3 weeks, we will commence planning for the 18th Albany Conversation, June 2013, and so I will be contacting you again soon. > > I thank you for your interest and help. > > Cheers > > > Rama > ****** > Prof. Ramaswamy H. Sarma > Department of Chemistry > State University of New York at Albany > Albany NY 12222 USA > > phone: 518-456-9362 > fax: 518-452-4955 > email: rhs07(a)albany.edu > > > > > >

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[Compbio-allhands] Scientific Web Applications Developer Wanted
by Custer, Ashley 15 Dec '11

15 Dec '11

Hi all, The Babbitt lab has an urgent and immediate need for a web applications developer. If you know anyone looking for a permanent, temporary, or part-time position in this area, please pass it on. Thanks. Patsy Babbitt -- Patricia Babbitt Professor and Vice Chair, Department of Bioengineering & Therapeutic Sciences Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2550 Byers Hall Room508E 1700 4th Street San Francisco, CA 94158-2330, USA (CA 94158 for direct delivery by courier) Tel +1 (415) 476-3784 Fax +1 415-502-8193 Email: babbitt(a)cgl.ucsf.edu<mailto:babbitt@cgl.ucsf.edu> <mailto:babbitt@cgl.ucsf.edu> Web: http://babbittlab.ucsf.edu/ Assistant: Ms. Ashley Custer, +1 415-514-1214, 415-514-4861 Ashley.Custer(a)ucsf.edu<mailto:Ashley.Custer@ucsf.edu>

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[Compbio-allhands] Fwd: please advertise this postdoc position
by Andrej Sali 13 Dec '11

13 Dec '11

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: Chandra Verma <chandra(a)bii.a-star.edu.sg> > Subject: please advertise this postdoc position > Date: December 13, 2011 6:37:25 PM PST > To: undisclosed-recipients:; > > dear colleagues > > i would be very grateful if you could, when you have some time spare, please help by advertising this amongst those who you think may be interested. > > thanks very much > > chandra > > > a postdoctoral position is available in singapore for 3 years. the applicant should be good at computational chemistry/modelling/simulations in the field of biomolecular mechanisms. the successful applicant will work with teams of experimentalists. Projects will be focused with a view to developing mechanistic models and also designing small molecules/peptides. a major project here examines several aspect of the p53 pathway including peptide/small molecule design as well as mechanisms underlying basic biology, such as effects of post-translational mechanisms. most of our work is tested in the laboratories of collaborators.the job is expected to start early 2012. if interested, please email your cv and have 2-3 letters of reference sent to chandra(a)bii.a-star.edu.sg. > also open to experimentalists with biochemical/biophysical/structural training interested in switching to simulations. >

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[Compbio-allhands] Fwd: CTBP 2012 Postdoctoral Fellowships
by Andrej Sali 07 Dec '11

07 Dec '11

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: "Christopher M. Smith" <csmith(a)ctbp.ucsd.edu> > Subject: CTBP 2012 Postdoctoral Fellowships > Date: December 7, 2011 3:04:09 PM PST > To: sali(a)salilab.org > > On behalf of Profs Herbert Levine, Jose Onuchic and Peter Wolynes, I am happy to announce that the Center for Theoretical Biological Physics at Rice University (Houston, Texas) and the University of California San Diego will be offering several Postdoctoral Fellowships in Biological Physics in 2012 for positions at Rice and UCSD. > > I would greatly appreciate your assistance in conveying this opportunity to graduate students in your lab and/or department who will be looking for postdoctoral positions next year. I have also taken the liberty of attaching CTBP Postdoctoral Fellowship recruitment flyers for both the positions at Rice and UCSD. > > ----------------------------------------------------------- > > CTBP is a consortium of researchers from UCSD, the Salk Institute for Biological Studies and Rice University, involved in research on fundamental problems at the interface between physics and biology. Current synergy research areas include, Cellular Tectonics, the dynamic mesoscale structure of the intracellular milieu; Computational Approaches to Intracellular and Intercellular Communication, chemical-based reaction-diffusion governed communication across complex spaces; and Gene Regulatory Networks, genetic/signaling networks exhibit specificity and robustness in the face of intrinsic stochasticity, and yet retain evolvability. Our research ranges from fundamental issues in molecular biophysics, cell and multicellular biology, and genetic networks to pressing biomedical questions raised by the study of diseases such as cancer. > > We are actively recruiting recent quantitative science (physics, mathematics, chemistry, etc.) Ph.D. graduates for postdoctoral positions beginning in 2012. We are looking to fill several positions with postdoctoral candidates that are well-versed in quantitative science, but who are very interested in learning and tackling > research problems in the realm of biology and biomedicine. Previous experience in working on living systems may be beneficial, but is not necessary. CTBP postdoctoral scholars will participate in leading-edge research with world-renowned faculty and at the same time will be provided opportunities to expand career-enhancing skill sets (grant writing, teaching, mentoring undergraduate research students/projects, etc.). CTBP postdoctoral scholars will also share in unique opportunities to gain hands-on experience in biological techniques while working closely with experimental scientists. An initial review of applications will begin in early February 2012. > > Applicants are asked to visit http://ctbp.rice.edu for additional information on CTBP Postdoctoral opportunities, or they may contact Christopher M. Smith, PhD, CTBP/UCSD, 9500 Gilman Drive, MC0374, San Diego, CA 92093-0374, 858-534-8370, csmith@ctbp@ucsd.edu. > > ----------------------------------------------------------- > > Christopher M. Smith, PhD. > Center for Theoretical Biological Physics > University of California / Rice University > csmith(a)ctbp.ucsd.edu (858) 534-8370 >

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[Compbio-allhands] Fwd: JOB: Fellowship/Junior academic posts at Edinburgh Informatics
by Tom Ferrin 07 Dec '11

07 Dec '11

-------- Original Message -------- Subject: JOB: Fellowship/Junior academic posts at Edinburgh Informatics Date: Wed, 07 Dec 2011 12:40:21 +0000 From: Bob Fisher <rbf(a)inf.ed.ac.uk> Organization: School of Informatics, The University of Edinburgh To: tef(a)cgl.ucsf.edu Fellowship/Junior academic posts in Informatics The University of Edinburgh has announced a large number of 5 year fellowships which gradually transform into permanent academic posts over the 5 years. The academic posts will be entry level (Lecturer/Assistant Professor). The School of Informatics is one of the world's top research leaders in computer science/informatics. The University of Edinburgh is one of the world's top research universities, in one of the world's most pleasant cities. One of the priority areas is 'Data Intensive Research', which can include computer vision/image analysis researchers. (The other 5 non-imaging areas are listed below.) Your main focus MUST be on the 'Data Intensive' aspects, but the source of the data could be imagery/video and its linkage to other large data sources, eg web, large image databases, broadcast TV streams, etc. These posts are for top candidates only. You MUST have a minimum of 2 excellent publications, such as in PAMI or ICCV/ECCV/ACCV/CVPR oral papers. Anything less will not be considered in this recruitment round. The general advert is at : http://www.jobs.ed.ac.uk/vacancies/index.cfm?fuseaction=vacancies.detail&va… and there are a small number of Informatics-specific details at: http://www.jobs.ed.ac.uk/vacancies/index.cfm?fuseaction=vacancies.furtherde… There are three closing dates: 16th January, 29th February and 16th April 2012. You can apply at any of them. There are 5 other priority areas in case you have colleagues who might be interested: - Software Engineering: model-driven development, testing, verification and security - Computational Cognitive Science - Systems: particularly operating systems and multicore - Networks - Data Intensive Research - Modelling & Simulation For queries about the Data Intensive area, contact me: rbf(a)inf.ed.ac.uk For queries about the other themes, contact the Head of School: Prof. David Robertson, dr(a)inf.ed.ac.uk ================ Prof. Robert B. Fisher, School of Informatics, Univ. of Edinburgh Dean of Research, College of Science and Engineering 1.26 Informatics Forum, 10 Crichton St, Edinburgh EH8 9AB, UK +44-(131)-651-3441 (direct line), +44-(131)-651-3443 (secretary) Fax: +44-(131)-650-6899 E-MAIL: r.b.fisher A@T ed.ac.uk http://www.inf.ed.ac.uk/people/staff/Robert_Fisher.html The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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[Compbio-allhands] 12/7/11 Seminar with Tom Tuschl
by Nicole Takesono Flowers 02 Dec '11

02 Dec '11

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems **Wednesday, 2 PM** Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Tom Tuschl Rockefeller University Characterization of regulatory small RNAs and RNA-binding proteins December 7, 2011 M. McManus, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] 12/1/11 Seminar with Doug Lauffenberger
by Nicole Takesono Flowers 30 Nov '11

30 Nov '11

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Doug Lauffenberger MIT Quantitative Cell Bioengineering Analysis of EGF Receptor Inhibitor Effectiveness in Cancer Therapeutics December 1, 2011 K. Giacomini, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Nodality Job Opening
by Tom Ferrin 30 Nov '11

30 Nov '11

-------- Original Message -------- Subject: Nodality Job Opening Date: Wed, 30 Nov 2011 14:48:40 +0000 From: David Spellmeyer <david.spellmeyer(a)nodality.com> To: Jacobson, Matt <Matt.Jacobson(a)ucsf.edu>, tef(a)cgl.ucsf.edu <tef(a)cgl.ucsf.edu>, Shoichet, Brian <shoichet(a)cgl.ucsf.edu> Hi Matt, Tom and Brian, We have an opening <http://www.nodality.com/careers/openings/scientist-bioinformatics.phtml> for a bioinformatics scientist in our computational sciences group here at Nodality. We are looking for an individual who wants to join a dynamic, growing organization working to make a difference in the lives of patients in cancer and autoimmunity. The technology we use detects and quantifies protein function at the single cell level and correlates those changes to drug response. Our group works very closely with our research biologists, clinical development, instrumentation and automation experts. We have a track record of publishing <http://www.nodality.com/publications/> our results in high-impact journals and presenting our work at major conferences. Would you have any recommendations for individuals you think might be a good fit for the group? Please feel free to forward this to anyone you think might be interested. Thank you, David ===== David Spellmeyer | CTO & CIO | Nodality | 201 Gateway Blvd | South San Francisco, CA 94080 | david.spellmeyer(a)nodality.com <mailto:david.spellmeyer@nodality.com> | 650-827-8016 (P) | 650-827-8001 (F) | 510-915-4153 (M) The material in this transmission may contain confidential information intended only for the addressee. If you are not the addressee, any disclosure or use of this information by you is strictly prohibited. If you have received this transmission in error, please delete it, destroy all copies, and notify the sender immediately by reply or by calling 1-650-827-8016.

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[Compbio-allhands] Fwd: REMINDER: On Behalf of Taekjip Ha and Klaus Schulten - Postdoctoral Fellowship Opportunities with NSF's Center for the Physics of Living Cells (CPLC) - PLEASE CIRCULATE
by Andrej Sali 28 Nov '11

28 Nov '11

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: "Flanegin, Susan A" <flanegin(a)illinois.edu> > Subject: REMINDER: On Behalf of Taekjip Ha and Klaus Schulten - Postdoctoral Fellowship Opportunities with NSF's Center for the Physics of Living Cells (CPLC) - PLEASE CIRCULATE > Date: November 28, 2011 11:01:26 AM PST > To: "Flanegin, Susan A" <flanegin(a)illinois.edu> > > > Dear Colleagues, > We are writing to remind you of several postdoctoral fellowship opportunities for the coming academic year, starting September 2012, in experimental and theoretical biophysics in the "Center for the Physics of Living Cells" (CPLC), a National Science Foundation Physics Frontier Center at the University of Illinois, Urbana-Champaign. > > Research in the Center for the Physics of Living Cells falls into one of four themes: > > 1. Maximizing information content of single molecule experiments; > > 2. Using synthetic nanostructures for high speed single molecule spectroscopy; > > 3. Observing individual events within single cells; and > > 4. Extending computation to biologically relevant timescales, and theory to greater biological realism. > > Fellows will use state-of-the-art experimental and theoretical biophysical tools to accomplish these goals: optical tweezers, single-molecule fluorescence microscopy, fabrication of synthetic nanostructure, high-speed, low-noise electrical measurements, live cell imaging, microscopic and coarse-grained molecular simulations, stochastic modeling, as well as the standard methods of molecular and cellular biology and genetics. Research will involve both the development and improvement of experimental and computational techniques and the application of these techniques to particular biological processes such as replication, transcription, translation, cell transport and motility. As projects are collaborative endeavors between several labs, the fellows will have the opportunity to be jointly advised by two or more faculty members of the CPLC. > > Apply via https://my.physics.illinois.edu/join/ no later than December 2, 2011. Applications should include: cover letter; curriculum vita; research statement; publications list; and contact information for three references. Applications received after the December 2nd deadline may not be considered. A full job description can be found at: http://www.cplc.illinois.edu/opps/postdocs.asp > > Please post and circulate the attached announcement or if interested, apply accordingly. > > For more information about CPLC, please visit http://cplc.illinois.edu/opps/postdocs.asp > > Thank you. > > Taekjip Ha and Klaus Schulten > Co-directors, Center for the Physics of Living Cells > http://www.cplc.illinois.edu > University of Illinois at Urbana-Champaign > 1110 West Green Street, MC 704 > Urbana, IL 61801-3080, USA >

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[Compbio-allhands] QBC Journal Club, Tuesday, November 15- 10:45AM, GH Aud
by Nicole Takesono Flowers 23 Nov '11

23 Nov '11

BMI ~ BP ~ CCB ~ PSPG Tuesday, November 29 10:45 am, GH Auditorium Daniel Himmelstein, iPQB Ontology engineering Alterovitz et al. Nature Biotechnology 28, 128-130 (2010) Noah Younger, CCB Selective killing of cancer cells by small molecule targeting the stress response to ROS. Lakshmi Raj, et. al. Nature. Vol. 475, pp 231-234 (2011) bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] QBC Journal Club, Tuesday, November 22- 10:45AM, GH Aud
by Nicole Takesono Flowers 16 Nov '11

16 Nov '11

BMI ~ BP ~ CCB ~ PSPG Tuesday, November 22 10:45 am, GH Auditorium Justin Meyerowitz, CCB Organization of intracellular reactions with rationally designed RNA assemblies. Delebecque CJ, Lindner PA, Aldaye FA. Science 333:470-474; July 2011. John Haliburton, iPQB Drosophila Microbiome Modulates Host Developmental and Metabolic Homeostasis via Insulin Signaling Seung Chul Shin, et al. Science 334, 670 (2011) bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Junior Professorship in computational biology at Saarland University
by Florian Lauck 15 Nov '11

15 Nov '11

Hello, The Center for Bioinformatics at Saarland University has an opening. Basically, candidates can apply right after their PhD, but a few years as a postdoc are typical. See details and contact below. Best, Florian Begin forwarded message: > From: Volkhard Helms <volkhard.helms(a)bioinformatik.uni-saarland.de> > Date: November 15, 2011 12:12:00 AM PST > To: <Florian.Lauck(a)ucsf.edu> > Subject: Juniorprofessur am ZBI [...] > > UNIVERSITÄT DES SAARLANDES - W1 Computational Biology - Frist: 01.12.2011 > Saarland University is a Campus university with international alignment and pronounced research profile. A number of research institutes in the vicinity of the university and dedicated support for the foundation of start up companies bring about an ideal field for innovation and technology transfer. The Center for Bioinformatics (CBI) at Saarland University is one of the five centers for excellence for Computational Biology that received startup funding by the German Research Foundation (Deutsche Forschungsgemeinschaft). In the CBI 10 institutes of Saarland University from the areas of life sciences, mathematics and informatics collaborate with the research divisions of the Max-Planck Institute for Informatics, the German Research Center for Artificial Intelligence GmbH (DFKI) and the Fraunhofer Institute for Biomedical Engineering. Saarland University is seeking an outstanding scientist for the full-time position of a Junior Professor for Computational Biology (W1) offered for a three-year term, with a possible extension of another three years, dependable on a teaching evaluation and an external evaluation of the research activities. We are seeking to attract an individual with an excellent international reputation in Computational Biology. The applicant must have a Ph.D. degree and should exhibit internationally regarded previous research results in the field of computational biology. The position is supposed to strengthen the focus of the center on the analysis of the genetic, epigenetic, or transcriptomics basis of diseases, both concerning the human host and, in the case of infections, the pathogen. Basic research as well as research targeted towards new approaches in diagnosis, prognosis and therapy are considered. Research on evolutionary processes in disease development is of special interest. We expect the candidate to participate in collaborative interdisciplinary research projects with partners both on and off campus. The candidate is expected to participate in teaching in the curricula of the center in computational biology and related study programs. The teaching requirement amounts to 4 SWS (6 credits) per semester. Female candidates are encouraged to apply and will be treated favorably in case of equal qualification. Given equal qualifications, handicapped applicants will be considered on a preferential basis. All applications should include curriculum vitae, list of publications, short research plan, copies of degree certificates, copies of the five most important publications and a list of five references. Please send your application no later than December 1, 2011 to Prof. Dr. Dr. Thomas Lengauer, Center for Bioinformatics at Saarland University, Building E2 1, 66123 Saarbrücken, Germany. Should you have any further questions don´t hesitate to contact Mrs. P. Scherer-Geiss, CEO of Center for Bioinformatics Tel. +49-(0)681/302-64705, psg(a)bioinf.uni-sb.de > ___________________________________________________________________ Florian Lauck, MSc Assistant Specialist Babbitt Lab Department of Bioengineering and Therapeutic Sciences 1700 4th Street University of California, San Francisco San Francisco, CA 94143-2330, USA +1 (415) 502 1248 babbittlab.ucsf.edu/florian.html linkedin.com/in/flolauck

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[Compbio-allhands] QBC Journal Club, Tuesday, November 15- 10:45AM, GH Aud
by Nicole Takesono Flowers 09 Nov '11

09 Nov '11

BMI ~ BP ~ CCB ~ PSPG Tuesday, November 15 10:45 am, GH Auditorium Brittany Fotsch, CCB Complement factor H binds malondialdehyde epitopes and protects from oxidative stress. Weissmann, et. al. Nature 478, 76-81 (06 October 2011) David Mavor, iPQB DNA stretching by bacterial initiators promotes replication origin opening Duderstadt et al Nature, 478:209 bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Peptoid computation post-doc openings
by Andrej Sali 06 Nov '11

06 Nov '11

Andrej (Sent from my iPhone) Begin forwarded message: > From: Ronald Zuckermann <rnzuckermann(a)lbl.gov> > Date: November 6, 2011 5:20:36 PM PST > To: matt.jacobson(a)ucsf.edu, Brian Shoichet <shoichet(a)cgl.ucsf.edu>, kortemme(a)cgl.ucsf.edu, Andrej Sali <sali(a)salilab.org>, "Wells, Jim" <Jim.Wells(a)ucsf.edu>, Joseph DeRisi <joe(a)derisilab.ucsf.edu>, Ken Dill <dill(a)maxwell.compbio.ucsf.edu>, "CRAIK, CHARLES" <craik(a)cgl.ucsf.edu>, Zev Gartner <Zev.Gartner(a)ucsf.edu>, shokat(a)cmp.ucsf.edu > Cc: Steve Whitelam <SWhitelam(a)lbl.gov> > Subject: Peptoid computation post-doc openings > > Dear UCSF Colleagues, > > I wanted to alert you to a couple of computational post-doc openings at the Molecular Foundry to study the folding and self-assembly of peptoids: > > MD simulations of peptoid folding: http://nanotheory.lbl.gov/images/position_description_atomistic.pdf > Coarse-grain modeling of peptoid self-assembly: http://nanotheory.lbl.gov/images/position_description_coarsegrained.pdf > > These positions are with my close Theory collaborator, Steve Whitelam. We are interactively making molecules and studying them computationally, and are looking for post-docs who would enjoy this interplay between theory and experiment. > > Please pass this along and let people know we are happy to discuss more details anytime! Thanks and best regards, > > -Ron > > > -- > > Ronald Zuckermann, Ph.D. > Biological Nanostructures Facility > The Molecular Foundry > Lawrence Berkeley National Laboratory > 1 Cyclotron Rd.; MS 67-5117 > Berkeley, CA 94720 > > (510) 486-7091 > rnzuckermann(a)lbl.gov > http://foundry.lbl.gov >

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[Compbio-allhands] Fwd: University of Illinois - Urbana-Champaign, Experimental Biological Physics Faculty position
by Andrej Sali 04 Nov '11

04 Nov '11

Begin forwarded message: > From: "taekjip ha" <taekjipha(a)physics.illinois.edu> > Subject: University of Illinois - Urbana-Champaign, Experimental Biological Physics Faculty position > Date: November 4, 2011 6:31:34 AM PDT > To: "taekjip ha" <taekjipha(a)physics.illinois.edu> > > Dear Colleagues, > > I would like to bring to your attention the attached position for a full-time tenured or tenure-track position at the University of Illinois Department of Physics. This position is in the area of experimental biological physics, with an emphasis in cellular or systems-level biophysics, complementing strengths in molecular biophysics. > > Start date is as early as August 16, 2012. A Ph.D., or equivalent, is required along with the ability to teach effectively at both undergraduate and graduate levels and to conduct a vigorous and significant program in an area of contemporary biological physics. The successful applicant will be joining a department with active programs in both experimental and theoretical biological physics. > > Applicants should go online to: https://jobs.illinois.edu to complete and submit an application form. A curriculum vitae, a publication list, a summary of research interests and accomplishments, a statement of teaching interests and experience, and the names and addresses of four references should be submitted at that time. Applicants will be evaluated upon submission of materials. > > Closing date is December 1, 2010. Applications submitted after this date will be accepted but are not guaranteed full consideration. Salary will be competitive and commensurate with qualifications. Online applications are strongly preferred but applications by mail will be accepted (send care of Margie Gamel, Dept. of Physics, University of Illinois, Urbana-Champaign, 1110 W. Green St., Urbana, Illinois 61801-3080, U.S.A.). Illinois is an Affirmative Action /Equal Opportunity Employer and welcomes individuals with diverse backgrounds, experiences, and ideas who embrace and value diversity and inclusivity. (www.inclusiveillinois.illinois.edu) > > Further information may be found at: https://jobs.illinois.edu/default.cfm?page=job&jobID=4172 > > If you have received this in error, or in duplicate, I apologize; please forward it to an interested colleague. > > For the Search Committee, > > > Taekjip Ha > Investigator, Howard Hughes Medical Institute > Professor, University of Illinois at Urbana-Champaign > 133 Loomis Laboratory of Physics, MC 704 > 1110 W. Green St.; Urbana, IL 61801-3080 > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: On Behalf of Taekjip Ha and Klaus Schulten - Postdoctoral Fellowship Opportunities with NSF's Center for the Physics of Living Cells (CPLC) - PLEASE POST and CIRCULATE
by Andrej Sali 02 Nov '11

02 Nov '11

Begin forwarded message: > From: "Flanegin, Susan A" <flanegin(a)illinois.edu> > Subject: FW: On Behalf of Taekjip Ha and Klaus Schulten - Postdoctoral Fellowship Opportunities with NSF's Center for the Physics of Living Cells (CPLC) - PLEASE POST and CIRCULATE > Date: November 2, 2011 2:13:07 PM PDT > To: "mchee(a)prognosysbio.com" <mchee(a)prognosysbio.com>, "mcolvin(a)ucmerced.edu" <mcolvin(a)ucmerced.edu>, "mdiez(a)mit.edu" <mdiez(a)mit.edu>, "meganmayerle(a)yahoo.com" <meganmayerle(a)yahoo.com>, "meglio(a)lps.ens.fr" <meglio(a)lps.ens.fr>, "merkiene(a)fermentas.lt" <merkiene(a)fermentas.lt>, "mhingorani(a)wesleyan.edu" <mhingorani(a)wesleyan.edu>, "micah(a)neu.edu" <micah(a)neu.edu>, "michael.elbaum(a)weizmann.ac.il" <michael.elbaum(a)weizmann.ac.il>, "michael.rosen(a)utsouthwestern.edu" <michael.rosen(a)utsouthwestern.edu>, "michael_paesler(a)ncsu.edu" <michael_paesler(a)ncsu.edu>, "michaelis(a)lmu.de" <michaelis(a)lmu.de>, "michalet(a)chem.ucla.edu" <michalet(a)chem.ucla.edu>, "minhash(a)rsc.org" <minhash(a)rsc.org>, "minhash(a)rsc.org" <minhash(a)rsc.org>, "Mitsuo.Ikebe(a)umassmed.edu" <Mitsuo.Ikebe(a)umassmed.edu>, "modesto.orozco(a)bsc.es" <modesto.orozco(a)bsc.es>, "modesto(a)mmb.pcb.ub.es" <modesto(a)mmb.pcb.ub.es>, "Mohamed_Sobhy(a)hms.harvard.edu" <Mohamed_Sobhy(a)hms.harvard.edu>, "mokhalil(a)mit.edu" <mokhalil(a)mit.edu>, "MORIMOTO(a)northwestern.edu" <MORIMOTO(a)northwestern.edu>, "mpoirier(a)mps.ohio-state.edu" <mpoirier(a)mps.ohio-state.edu>, "m-ratner(a)nwu.edu" <m-ratner(a)nwu.edu>, "mteruel(a)stanford.edu" <mteruel(a)stanford.edu>, "mtoku(a)lab.nig.ac.jp" <mtoku(a)lab.nig.ac.jp>, "mtraksel+(a)pitt.edu" <mtraksel+(a)pitt.edu>, "mulbrich(a)berkeley.edu" <mulbrich(a)berkeley.edu>, "mwiener(a)virginia.edu" <mwiener(a)virginia.edu>, "myoshida(a)res.titech.ac.jp" <myoshida(a)res.titech.ac.jp>, "nathan.baker(a)wustl.edu" <nathan.baker(a)wustl.edu>, "naumann(a)chem.iupui.edu" <naumann(a)chem.iupui.edu>, "ned.seeman(a)nyu.edu" <ned.seeman(a)nyu.edu>, "nfschere(a)midway.uchicago.edu" <nfschere(a)midway.uchicago.edu>, "Nir.Gov(a)weizmann.ac.il" <Nir.Gov(a)weizmann.ac.il>, "nlallbri(a)uci.edu" <nlallbri(a)uci.edu>, "noga.kozer(a)ludwig.edu.au" <noga.kozer(a)ludwig.edu.au>, "nwalter(a)umich.edu" <nwalter(a)umich.edu>, "nwells(a)lanl.gov" <nwells(a)lanl.gov>, "oby(a)cs.tu-berlin.de" <oby(a)cs.tu-berlin.de>, "olga.mayans(a)unibas.ch" <olga.mayans(a)unibas.ch>, "ortoleva(a)indiana.edu" <ortoleva(a)indiana.edu>, "oshea(a)biochem.ucsf.edu" <oshea(a)biochem.ucsf.edu>, "pantoja(a)caltech.edu" <pantoja(a)caltech.edu>, "pappu(a)wustl.edu" <pappu(a)wustl.edu>, "pastor(a)cber.FDA.gov" <pastor(a)cber.FDA.gov>, "pclark1(a)nd.edu" <pclark1(a)nd.edu>, "peter.moore(a)yale.edu" <peter.moore(a)yale.edu>, "Petra.Fromme(a)asu.edu" <Petra.Fromme(a)asu.edu>, "petros(a)ethz.ch" <petros(a)ethz.ch>, "pierce(a)caltech.edu" <pierce(a)caltech.edu>, "pks(a)tbi.univie.ac.at" <pks(a)tbi.univie.ac.at>, "porte001(a)umn.edu" <porte001(a)umn.edu>, "ptso(a)mit.edu" <ptso(a)mit.edu>, "pwkr(a)centrosome.dna.caltech.edu" <pwkr(a)centrosome.dna.caltech.edu>, "pwolynes(a)ucsd.edu" <pwolynes(a)ucsd.edu>, "quxh(a)berkeley.edu" <quxh(a)berkeley.edu>, "raldrich(a)mail.utexas.edu" <raldrich(a)mail.utexas.edu>, "rama.ranganathan(a)utsouthwestern.edu" <rama.ranganathan(a)utsouthwestern.edu>, "ramaro(a)mccammon.ucsd.edu" <ramaro(a)mccammon.ucsd.edu>, "rao(a)cua.edu" <rao(a)cua.edu>, "rfishel(a)osu.edu" <rfishel(a)osu.edu>, "richard.lavery(a)ibcp.fr" <richard.lavery(a)ibcp.fr>, "rjgarcia(a)mail.bio.tamu.edu" <rjgarcia(a)mail.bio.tamu.edu>, "rk2(a)uark.edu" <rk2(a)uark.edu>, "RL1(a)york.ac.uk" <RL1(a)york.ac.uk>, "Robert.Bittl(a)physik.FU-Berlin.de" <Robert.Bittl(a)physik.FU-Berlin.de>, "robertop(a)intra.niddk.nih.gov" <robertop(a)intra.niddk.nih.gov>, "robphillips(a)mageos.com" <robphillips(a)mageos.com>, "roderick.lim(a)unibas.ch" <roderick.lim(a)unibas.ch>, "roskies(a)cpwsca.psc.edu" <roskies(a)a.psc.edu>, "roux(a)uchicago.edu" <roux(a)uchicago.edu>, "roy.bar-ziv(a)weizmann.ac.il" <roy.bar-ziv(a)weizmann.ac.il>, "rtompkins(a)partners.org" <rtompkins(a)partners.org>, "ruthnu(a)helix.nih.gov" <ruthnu(a)helix.nih.gov>, "sabeysi1(a)jhu.edu" <sabeysi1(a)jhu.edu>, "sali(a)salilab.org" <sali(a)salilab.org>, "sandler(a)microbio.umass.edu" <sandler(a)microbio.umass.edu>, "Sandrine.Etienne-Manneville(a)curie.fr" <Sandrine.Etienne-Manneville(a)curie.fr>, "saveez(a)hms.harvard.edu" <saveez(a)hms.harvard.edu>, "sb10031(a)cam.ac.uk" <sb10031(a)cam.ac.uk>, "schlick(a)NYU.EDU" <schlick(a)nyu.edu>, "schlierf(a)bcube-dresden.de" <schlierf(a)bcube-dresden.de>, "SCHWI001(a)MC.DUKE.EDU" <SCHWI001(a)MC.DUKE.EDU>, "schwille(a)biotec.tu-dresden.de" <schwille(a)biotec.tu-dresden.de>, "scraig(a)jhmi.edu" <scraig(a)jhmi.edu>, "se.praly(a)lps.ens.fr" <se.praly(a)lps.ens.fr>, "Sean.Decatur(a)oberlin.edu" <Sean.Decatur(a)oberlin.edu>, "seg(a)u.washington.edu" <seg(a)u.washington.edu>, "shannonyan(a)berkeley.edu" <shannonyan(a)berkeley.edu>, "shawn(a)physics.ucsb.edu" <shawn(a)physics.ucsb.edu>, "shokri.l(a)neu.edu" <shokri.l(a)neu.edu>, "shs(a)chem.psu.edu" <shs(a)chem.psu.edu>, "shubeita(a)chaos.utexas.edu" <shubeita(a)chaos.utexas.edu>, "shwhite(a)uci.edu" <shwhite(a)uci.edu>, "simon.rainville(a)phy.ulaval.ca" <simon.rainville(a)phy.ulaval.ca>, "simons(a)mpi-cbg.de" <simons(a)mpi-cbg.de>, "singer(a)chemistry.ohio-state.edu" <singer(a)chemistry.ohio-state.edu>, "singlemolecule(a)gmail.com" <singlemolecule(a)gmail.com>, "sivasank(a)stanford.edu" <sivasank(a)stanford.edu>, "sjb1(a)psu.edu" <sjb1(a)psu.edu> > > > Dear Colleagues, > We are writing to inform you of several postdoctoral fellowship opportunities for the coming academic year, starting September 2012, in experimental and theoretical biophysics in the "Center for the Physics of Living Cells" (CPLC), a National Science Foundation Physics Frontier Center at the University of Illinois, Urbana-Champaign. > > Research in the Center for the Physics of Living Cells falls into one of four themes: > > 1. Maximizing information content of single molecule experiments; > > 2. Using synthetic nanostructures for high speed single molecule spectroscopy; > > 3. Observing individual events within single cells; and > > 4. Extending computation to biologically relevant timescales, and theory to greater biological realism. > > Fellows will use state-of-the-art experimental and theoretical biophysical tools to accomplish these goals: optical tweezers, single-molecule fluorescence microscopy, fabrication of synthetic nanostructure, high-speed, low-noise electrical measurements, live cell imaging, microscopic and coarse-grained molecular simulations, stochastic modeling, as well as the standard methods of molecular and cellular biology and genetics. Research will involve both the development and improvement of experimental and computational techniques and the application of these techniques to particular biological processes such as replication, transcription, translation, cell transport and motility. As projects are collaborative endeavors between several labs, the fellows will have the opportunity to be jointly advised by two or more faculty members of the CPLC. > > Apply via https://my.physics.illinois.edu/join/ no later than December 2, 2011. Applications should include: cover letter; curriculum vita; research statement; publications list; and contact information for three references. Applications received after the December 2nd deadline may not be considered. A full job description can be found at: http://www.cplc.illinois.edu/opps/postdocs.asp > > Please post and circulate the attached announcement or if interested, apply accordingly. > > For more information about CPLC, please visit http://cplc.illinois.edu/opps/postdocs.asp > > Thank you. > > Taekjip Ha and Klaus Schulten > Co-directors, Center for the Physics of Living Cells > http://www.cplc.illinois.edu > University of Illinois at Urbana-Champaign > 1110 West Green Street, MC 704 > Urbana, IL 61801-3080, USA > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] 11/3/11 Seminar with Adam Cohen
by Nicole Takesono Flowers 31 Oct '11

31 Oct '11

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Adam Cohen Harvard University Fluorescent voltage-indicating proteins: imaging spiking from E. coli to neurons November 3, 2011 B. Huang, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Faculty Position in Chemical Biology at UNC
by Brian Shoichet 31 Oct '11

31 Oct '11

Fyi Brian Shoichet Professor Dept. of Pharmaceutical Chemistry UCSF http://shoichetlab.compbio.ucsf.edu ---------- Forwarded message ---------- From: "Weeks, Kevin" <weeks(a)unc.edu> Date: Oct 31, 2011 4:01 AM Subject: Faculty Position in Chemical Biology at UNC To: Dear Colleagues, The Carolina Center for Genome Sciences is partnering with the Department of Chemistry to conduct a junior faculty search with a research focus in Chemical Biology and Chemical Genomics. This new colleague will join a group of highly inventive laboratories spanning the Departments of Biology, Chemistry and Computational Biology in the new Genome Sciences Building at UNC. The formal advertisement is attached. We ask you to encourage exceptional candidates to apply. With best regards, Kevin -- Kevin M Weeks . Kenan Distinguished Professor Department of Chemistry . Kenan Labs . 125 South Road University of North Carolina . Chapel Hill NC 27599-3290 http://www.chem.unc.edu/rna

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[Compbio-allhands] 10/27/11 Seminar with Jim Ferrell
by Nicole Takesono Flowers 26 Oct '11

26 Oct '11

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Jim Ferrell Stanford University Dissecting the Mitotic Trigger October 27, 2011 W. Lim, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Biochemistry Assistant Professor Position at Utah State University
by Brian Shoichet 24 Oct '11

24 Oct '11

Brian Shoichet Professor Dept. of Pharmaceutical Chemistry UCSF http://shoichetlab.compbio.ucsf.edu ---------- Forwarded message ---------- From: "Geraldine Child" <geri.child(a)usu.edu> Date: Oct 24, 2011 9:15 AM Subject: Biochemistry Assistant Professor Position at Utah State University To: Dear Colleagues, I would like to bring to your attention our current search for an assistant professor in the area of Biochemistry. Details of the position and application process are given below. Please pass this information on to appropriate postdoctoral associates in your laboratory. We are especially interested in receiving applications from female and minority candidates. Thank you, Alvan C. Hengge Department Head, Professor Department of Chemistry and Biochemistry Utah State University Logan UT 84322-0300 ____________________________________________________________________________________ Assistant Professor Biochemistry Utah State University The Department of Chemistry and Biochemistry at Utah State University invites applications for a R. Gaurth Hansen tenure-track assistant professor position in Biochemistry to begin Fall 2012. The successful candidate will develop a research program that complements at least one departmental focus area, such as macromolecular structure and function, or catalysis and reaction mechanism. Applicants must have a PhD in biochemistry, chemistry, or a related field, and postdoctoral experience. The position requires the development of an externally-funded research program, as well as teaching at the undergraduate and graduate levels. Candidates capable of teaching biophysical chemistry are particularly encouraged to apply. Applicants should submit a curriculum vitae, a concise description of future research projects, a description of how the research to be pursued complements existing research focus areas in the Department, a description of teaching experience and preferred teaching area(s), and the names and email addresses of three references. Apply online at http://jobs.usu.edu (REQ ID 052891). Evaluation of applicants will begin November 1, 2011 and will continue until the position is filled. Utah State University, located in Logan, Utah, is an Equal Opportunity/Affirmative Action Employer committed to assembling a diverse faculty. Women and members of minority groups are strongly encouraged to apply.

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[Compbio-allhands] Fwd: Opportunity for young investigators in Sweden
by Andrej Sali 24 Oct '11

24 Oct '11

Begin forwarded message: > From: Arne Elofsson <arne(a)bioinfo.se> > Subject: Opportunity for young investigators in Sweden > Date: October 24, 2011 5:41:31 AM PDT > To: Christine Orengo <orengo(a)biochem.ucl.ac.uk>, David Baker <dabaker(a)u.washington.edu>, Andrej Sali <sali(a)salilab.org>, d.jones(a)cs.ucl.ac.uk, e.bornberg(a)uni-muenster.de, Frishman Dmitrij <d.frishman(a)wzw.tum.de>, "David A. Liberles" <liberles(a)uwyo.edu> > > > Dear Colleagues > > At the moment there are openings for excellent young scientists in Sweden through a very well funded program named Wallenber Academy Fellows, see below for a link to a Swedish announcement. Therefore if you have any very good candidates with a PhD awarded between 2004 and 2007 and that have a serious interest to move to Sweden and work in an area related to ours, I would very much appreciate if you forwarded this mail to them. > > The application procedure is two steps. First the department can nominate candidates to the head of the university with a deadline of Dec 3 and then the university will select up to 10 candidates (of which 40% needs to be external). These will then have until Feb 29 to write the application. The grant is for 5 years and between 1 and and 1.5 MSEK (110-165 kEuro) per year and in addition the university will guarantee 50% of the salary and provide some sort of tenure track. > > > Here is the link (in Swedish) > > http://www.wallenberg.com/docs/kaw/nomineringsinbjudan-wallenberg-academy-f… > > Yours > > Arne > > --------------------------------------------------------- > Prof. Arne Elofsson Dep of Biochemistry and Biophysics > Tel:+46-8-16 4672 Stockholm University > Fax:+46-8-15 3679 10691 Stockholm, Sweden > Mobile: +46 70 695 1045 > Directions: see http://bioinfo.se/misc/directions.html > Net: arne(a)bioinfo.se http://bioinfo.se/ > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Comp Bio/Drug Discovery Internship opportunity at Novartis Emeryville
by Schnoes, Alexandra 21 Oct '11

21 Oct '11

Hello, This was circulated a bit ago but they are still looking. If you are interested please contact Eric Martin (below). I get the feeling they would love to take someone from UCSF. I know a little bit about the position, so if you have some basic questions you can shoot them to me too. Job description for Student Internship in Compuational Drug Discovery Most drug leads are discovered through experimental high-throughput screens, which cost about $1,000,000 and take 6-9 months. Efforts over many years to develop computational “in silico” screens have not resulted in sufficiently accurate models to provide a practical alternative. Recently, at Novartis, a protein family-based approach has produced models approximating experimental accuracy for the special cases of kinase and serine/cisteine protease enzyme families. These families include many pharmaceutically important drug targets. This 1-year internship involves learning to train and employ these models on new and existing drug discovery targets. The ideal candidate would understand the physical properties of organic compounds and proteins, and how they can interact, as well as familiarity with computer programming and running scientific calculations. Eric Martin ( eric.martin(a)novartis.com<mailto:eric.martin@novartis.com> ) Director, Computational Chemistry Novartis 4560 Horton St. Emeryville, CA 94608 510-923-3306 -- Alexandra Schnoes, PhD Program Coordinator, Graduate Student Internships for Career Exploration Scientist, Babbitt Laboratory University of California San Francisco 513 Parnassus Ave, S-224 Campus Box 0410 San Francisco, CA 94143 Tel: 415-476-0572 Fax: 415-476-0689 Email: alexandra.schnoes(a)ucsf.edu<mailto:alexandra.schnoes@ucsf.edu> Web: http://gsice.ucsf.edu<http://gsice.ucsf.edu/>

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[Compbio-allhands] Friday Seminar: The Role of Conformational Dynamics of G-Protein Coupled Receptors in Drug Design
by JoAnne Williams 19 Oct '11

19 Oct '11

This seminar may be of interest to you: -------------------------------------------- *Date: Friday, October 21, 2011* *Time: 11:00a-12:00p* *Location: BH215* *Speaker: **Prof. Nagarajan Vaidehi* *Department of Immunology, Beckman Research Institute, City of Hope Cancer* *Research Center* *The Role of Conformational Dynamics of G-Protein Coupled* *Receptors in Drug Design* Abstract: The superfamily of membrane proteins known as G-protein coupled receptors (GPCRs), mediate signal transduction in a wide array of different cell types. Drugs targeting GPCRs represent the core of modern medicine. Upon stimulation by a variety of signaling molecules (ranging from light to small molecules and large proteins), GPCRs trigger a diverse set of signaling pathways in the cell, by coupling to different intracellular proteins to transduce the signal. This functional diversity in signaling is achieved by the structural conformational dynamics of these receptors. In this talk, I will demonstrate that the combination of computational methods, X-ray crystallography, and fluorescence spectroscopy provides insight into the conformational ensemble sampled by GPCRs. Additionally, the effect of how the ligand binding leads to a shift in the relative population density in this ensemble will be discussed. An example of how structural insights gained from these fundamental biophysical techniques can be used to design drugs targeting a specific signaling pathway that is relevant in pancreatic cancer will be outlined. -- JoAnne Williams, Admin Analyst Shoichet & Jacobson Labs Department of Pharmaceutical Chemistry University of California, San Francisco UCSF MC 2550 Byers Hall, Rm 508 1700 4th Street San Francisco, CA 94158-2517 tel: (415) 514-4261 or (415) 502-7050 email: *joanne(a)picasso.ucsf.ed <http://joanne@picasso.ucsf.edu/>u* * * * *

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[Compbio-allhands] Fwd: International PhD Program - Announcement Spring Selection 2012
by Andrej Sali 19 Oct '11

19 Oct '11

Begin forwarded message: > From: "Wolf, Ingrid" <inwolf(a)biochem.mpg.de> > Subject: International PhD Program - Announcement Spring Selection 2012 > Date: October 19, 2011 7:32:25 AM PDT > To: "'Sali'" <sali(a)salilab.org> > > Dear Prof. Sali, > > Please find enclosed the announcement of our international PhD program in molecular and cellular life sciences. > > The International Max Planck Research School for Molecular and Cellular Life Sciences is jointly conducted by the Max Planck Institutes of Biochemistry, Neurobiology and Psychiatry, the Ludwig Maximilian University Munich and the Technical University Munich. The program, covering the disciplines of biochemistry, cell biology, molecular medicine, neurobiology and structural biology, offers a research oriented comprehensive and interdisciplinary training to doctoral students from all over the world. More than 60 distinct research projects are currently available. > > Qualified candidates are now invited to apply for the spring selection 2012. Deadline for application is January 15th, 2012. > All students accepted to the program will receive a generous PhD fellowship covering tuition and living expenses. > Further information and application details are available at: www.imprs-ls.de<http://www.imprs-ls.de/> > > We kindly ask you to communicate this announcement to potentially interested students or to display the flyer at your departmental bulletin board. > > > Yours sincerely, > > Ingrid Wolf > > __________________________________________________________________________________________ > Dr. Ingrid Wolf > Scientific Coordinator > International Max Planck Research School > for Molecular and Cellular Life Sciences > Am Klopferspitz 18 > 82152 Martinsried/Munich, Germany > phone: ++49 89 8578-2855 (Wed., Thu., Fri.) > fax: ++49 89 8578-2859 > email: inwolf(a)biochem.mpg.de > web: www.imprs-ls.de > > If you don't want to receive further mails from IMPRS-LS, please send us a reply email with the note "sign out" in the header. > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: help please in idenifying a candidate
by Brian Shoichet 18 Oct '11

18 Oct '11

FYI. ---------- Forwarded message ---------- From: Chandra Verma <chandra(a)bii.a-star.edu.sg> Date: Tue, Oct 18, 2011 at 3:11 AM Subject: help please in idenifying a candidate To: Brian Shoichet <shoichet(a)cgl.ucsf.edu> dear brian hope all is well. i need your help in identifying a suitable candidate - given that yours is one of the few places that combines computational with experimental. we have an opening for a person with 4-5 years postdoctoral experience to set up a small lab here in our institute in singapore. here is the ad i am planning on putting out. many thanks for your help and if you could suggest some other labs i could write to, will be much obliged. regards chandra A position is available for a team leader with a background in chemical biology to start a small group combining computational and experimental methods for screening small molecules against targets of therapeutic interest. The person will have at least 5-6 years of postdoctoral experience in this area. The institute has a variety of teams pursuing computational studies combining them with experimental work. The candidate will be expected to develop their own research program as well as work with other teams in setting up assays to test hypotheses generated. There are several opportunities to collaborate with academic, pharmaceutical and clinical groups in Singapore. The position will be in the Division of Modelling & Design in the Bioinformatics Institute (A*STAR) (http://www.bii.a-star.edu.sg/**research/bmad/bmad.php<http://www.bii.a-star.edu.sg/research/bmad/bmad.php> ). Please submit a resume and a research proposal and have 3 letters of reference sent to bettyk(a)bii.a-star.edu.sg and to chandra(a)bii.a-star.edu.sg. Informal enquiries may be made from chandra(a)bii.a-star.edu.sg -- Brian Shoichet Professor University of California, San Francisco Dept. of Pharmaceutical Chemistry phone: 415-514-4126; fax: 415-514-4260 http://shoichetlab.compbio.ucsf.edu

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[Compbio-allhands] Fwd: I have money for excellent semi-independent position for post-postdoc for a few years
by Andrej Sali 18 Oct '11

18 Oct '11

Begin forwarded message: > From: Burkhard Rost <rost(a)in.tum.de> > Subject: I have money for excellent semi-independent position for post-postdoc for a few years > Date: October 18, 2011 5:06:53 AM PDT > To: Schneider Reinhard <reinhard.schneider(a)uni.lu>, Kelso Janet <kelso(a)eva.mpg.de>, Bromberg Yana <YanaB(a)rci.rutgers.edu>, Michal Linial <michall(a)cc.huji.ac.il>, Ofran Yanay <yanay.ofran(a)gmail.com>, Ben-Tal Nir <NirB(a)tauex.tau.ac.il>, Schlessinger Avner <schles(a)salilab.org>, Sali Andrej <sali(a)salilab.org>, Lupas Andrei <andrei.lupas(a)tuebingen.mpg.de>, Sippl Manfred <sippl(a)came.sbg.ac.at>, Orengo Christine <orengo(a)biochemistry.ucl.ac.uk>, Valencia Alfonso <valencia(a)cnio.es>, Tramontano Anna <Anna.Tramontano(a)uniroma1.it>, Punta Marco <mp13(a)sanger.ac.uk>, Gaasterland Terry <tgaasterland(a)ucsd.edu> > > Dear Friends: > > I have funding for the position that Marco Punta just left in April this year to join Pfam. The official position is as Fellow ("for life" with funding for <3 years; official 'title' Carl von Linde Fellow: mind you is one those who helped toward inventing the fridge and one of those scientists who went out and made money) of the Institute of Advanced Studies @ the TUM. It comes with a lot of freedom, high visibility, and fair funding. Applicants would have to be in Germany most of the time and would be expected to use this as a jump board to find a tenure-track position somewhere. > > Any of you has any proposal? Ideally, I'd like to find a woman for this, because those are very much underrepresented in the list of current fellows. > > As always, this is unfortunately very urgent (application deadline: Nov 1). > > thanks for your help. > best wishes, > burkhard > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Seminar - Boris Turk, Josef Stefan Institute, Slovenia - Friday, Oct. 21 - 2pm - BH 413
by Hilary Mahon 17 Oct '11

17 Oct '11

Please see attached for additional information. --- Hilary Mahon Assistant to Dr. Sali University of California, San Francisco MC 2552 Byers Hall Room 503 1700 4th Street San Francisco, CA 94158-2330 Phone +1 (415) 514 4228 Fax +1 (415) 514 4231 Email hilary(a)salilab.org

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[Compbio-allhands] Fwd: Postdoctoral opportunities at Princeton
by Andrej Sali 17 Oct '11

17 Oct '11

Begin forwarded message: > From: "Biophysics" <biophys(a)princeton.edu> > Subject: Postdoctoral opportunities at Princeton > Date: October 17, 2011 1:51:35 PM PDT > To: "Biophysics" <biophys(a)princeton.edu> > Cc: <wbialek(a)princeton.edu>, "'Wingreen, Ned S.'" <wingreen(a)princeton.edu>, "Curtis Callan" <ccallan(a)princeton.edu>, "Chase P. Broedersz" <cbroeder(a)princeton.edu> > > Dear colleagues, > > We are in the midst of our annual search for young theorists interested in problems at the interface of physics and biology, and ask your help in bringing these opportunities to the attention of > interested (and interesting) candidates. The full text of the > advertisement, with application instructions, is attached below. > > Postdoctoral fellows have included a mix of people who have experience in biological physics, as well as those who are changing into the field from more traditional areas of physics. Lewis-Sigler Fellows are expected to have enough experience and maturity to articulate their own research program, although for both positions we favor fresh PhDs. All applicants will be considered for both positions. > > We have been fortunate in recent years, attracting a stream wonderful young colleagues who have now moved on to excellent faculty > positions. We hope you can help us as we try to replenish our > community. > > Although the nominal deadline has just passed, we are still reading new applications. Please do encourage people to act soon, though. We would like to interview promising candidates before the end of the calendar year. > > Many thanks, > > William Bialek > Chase Broedersz > Curtis Callan > Ned Wingreen > > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] 10/20/11 Clements Lecture with Anselm Levskaya
by Nicole Takesono Flowers 14 Oct '11

14 Oct '11

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Anselm Levskaya Clements Lecture Closed Loop Optogenetics for the Study of Neural Circuitry In Vivo October 20, 2011 C. Voigt, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: quantitative biology positions at UC San Diego
by Andrej Sali 05 Oct '11

05 Oct '11

Begin forwarded message: > From: Terry Hwa <hwa(a)ucsd.edu> > Subject: quantitative biology positions at UC San Diego > Date: October 4, 2011 9:16:27 PM PDT > To: Terence Hwa <thwa(a)ucsd.edu> > > > > Dear Friends, > > I am writing to tell you about some exciting opportunities for growth in the general area of quantitative biology at U.C. San Diego. Attached is a joint ad for 5 experimental searches at an assortment of levels being conducted across biology, physics, and chemistry, as well as two senior theorist positions (one in physics, another in chemistry). These positions are a part of a multi-year initiative to establish a world-class program in quantitative biology, broadly interpreted as an iterated dialogue between quantitative experimentation and theoretical reasoning of living systems. A similar number of positions are expected in the next two years. > > It is our goal to use these positions judiciously to assemble a dream team in quantitative biology, building on the vast base of biological research in the La Jolla basin, and leading the way to a new era in the biosciences. We encourage you to pass this information to interested junior and senior colleagues to pursue these opportunities together. > > thank you and best wishes, > > Terry Hwa > > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: looking for postdoc
by Jacobson, Matt 03 Oct '11

03 Oct '11

Begin forwarded message: From: Jeremy Schmit <schmit(a)phys.ksu.edu<mailto:schmit@phys.ksu.edu>> Date: October 3, 2011 12:55:27 PM PDT To: Fyl Pincus <fyl(a)mrl.ucsb.edu<mailto:fyl@mrl.ucsb.edu>>, Alex Levine <alevine(a)chem.ucla.edu<mailto:alevine@chem.ucla.edu>>, Jané Kondev <kondev(a)brandeis.edu<mailto:kondev@brandeis.edu>>, Seth Fraden <fraden(a)brandeis.edu<mailto:fraden@brandeis.edu>>, Bulbul Chakraborty <bulbul(a)brandeis.edu<mailto:bulbul@brandeis.edu>>, <hagan(a)brandeis.edu<mailto:hagan@brandeis.edu>>, Steve Whitelam <swhitelam(a)lbl.gov<mailto:swhitelam@lbl.gov>>, Steve Presse <stevenpresse(a)gmail.com<mailto:stevenpresse@gmail.com>>, Justin MacCallum <justin.maccallum(a)me.com<mailto:justin.maccallum@me.com>>, Chris Fennell <cfennell(a)me.com<mailto:cfennell@me.com>>, Kevin Plaxco <plaxco(a)chem.ucsb.edu<mailto:plaxco@chem.ucsb.edu>>, Paul Wiggins <wiggins(a)wi.mit.edu<mailto:wiggins@wi.mit.edu>>, Rob Phillips <phillips(a)pboc.caltech.edu<mailto:phillips@pboc.caltech.edu>>, <quake(a)stanford.edu<mailto:quake@stanford.edu>>, "Muschol, Martin" <mmuschol(a)usf.edu<mailto:mmuschol@usf.edu>>, adrian elcock <adrianelcock(a)gmail.com<mailto:adrianelcock@gmail.com>>, Tuomas Knowles <tpjk2(a)cam.ac.uk<mailto:tpjk2@cam.ac.uk>>, <dave.thirumalai(a)gmail.com<mailto:dave.thirumalai@gmail.com>>, <jliang(a)uic.edu<mailto:jliang@uic.edu>>, <draleigh(a)notes.cc.sunysb.edu<mailto:draleigh@notes.cc.sunysb.edu>>, Ken DIll <dill(a)laufercenter.org<mailto:dill@laufercenter.org>>, Yan Levin <levin(a)if.ufrgs.br<mailto:levin@if.ufrgs.br>>, <cjr(a)UDel.Edu<mailto:cjr@UDel.Edu>>, <baronp(a)engineering.ucsb.edu<mailto:baronp@engineering.ucsb.edu>>, <John.Carpenter(a)ucdenver.edu<mailto:John.Carpenter@ucdenver.edu>>, <tessier(a)rpi.edu<mailto:tessier@rpi.edu>>, "Laurence, Jennifer S" <laurencj(a)ku.edu<mailto:laurencj@ku.edu>>, <middaugh(a)ku.edu<mailto:middaugh@ku.edu>>, <pesmith(a)k-state.edu<mailto:pesmith@k-state.edu>>, <lednev(a)albany.edu<mailto:lednev@albany.edu>>, <Matt.Jacobson(a)ucsf.edu<mailto:Matt.Jacobson@ucsf.edu>>, <sen(a)buffalo.edu<mailto:sen@buffalo.edu>>, <Elan.Eisenmesser(a)ucdenver.edu<mailto:Elan.Eisenmesser@ucdenver.edu>>, <derouchey(a)uky.edu<mailto:derouchey@uky.edu>>, <lois(a)ccmr.cornell.edu<mailto:lois@ccmr.cornell.edu>>, <gary_pielak(a)unc.edu<mailto:gary_pielak@unc.edu>>, <enrique.delacruz(a)yale.edu<mailto:enrique.delacruz@yale.edu>>, <lattman(a)hwi.buffalo.edu<mailto:lattman@hwi.buffalo.edu>>, <fandrich(a)enzyme-halle.mpg.de<mailto:fandrich@enzyme-halle.mpg.de>>, <jsschreck(a)gmail.com<mailto:jsschreck@gmail.com>>, <zgw(a)cheme.caltech.edu<mailto:zgw@cheme.caltech.edu>>, <rakiyama(a)chem.kyushu-univ.jp<mailto:rakiyama@chem.kyushu-univ.jp>>, Claudio Chamon <chamon(a)bu.edu<mailto:chamon@bu.edu>>, <redner(a)bu.edu<mailto:redner@bu.edu>>, <lenhoff(a)UDel.Edu<mailto:lenhoff@UDel.Edu>>, <prausnit(a)cchem.berkeley.edu<mailto:prausnit@cchem.berkeley.edu>>, <nickpace(a)tamu.edu<mailto:nickpace@tamu.edu>>, <sudipta.maiti(a)gmail.com<mailto:sudipta.maiti@gmail.com>>, <belfog(a)rpi.edu<mailto:belfog@rpi.edu>>, <buddhapriya.chakrabarti(a)durham.ac.uk<mailto:buddhapriya.chakrabarti@durham.ac.uk>>, <Brewster(a)caltech.edu<mailto:Brewster@caltech.edu>>, <csantang(a)physics.umass.edu<mailto:csantang@physics.umass.edu>>, <bruinsma(a)physics.ucla.edu<mailto:bruinsma@physics.ucla.edu>>, <grason(a)mail.pse.umass.edu<mailto:grason@mail.pse.umass.edu>>, <muthu(a)polysci.umass.edu<mailto:muthu@polysci.umass.edu>>, Kings Ghosh <kingshuk.ghosh(a)du.edu<mailto:kingshuk.ghosh@du.edu>>, <ashok.prasad(a)colostate.edu<mailto:ashok.prasad@colostate.edu>>, <tolya(a)rice.edu<mailto:tolya@rice.edu>>, <drr2103(a)columbia.edu<mailto:drr2103@columbia.edu>>, <aalexand(a)mit.edu<mailto:aalexand@mit.edu>>, <gbrannigan(a)temple.edu<mailto:gbrannigan@temple.edu>>, <TLHead-Gordon(a)lbl.gov<mailto:TLHead-Gordon@lbl.gov>>, "Vinothan N. Manoharan" <vnm(a)seas.harvard.edu<mailto:vnm@seas.harvard.edu>>, <yal209(a)lehigh.edu<mailto:yal209@lehigh.edu>>, <dreeves(a)mit.edu<mailto:dreeves@mit.edu>>, <sam.safran(a)weizmann.ac.il<mailto:sam.safran@weizmann.ac.il>>, <v-chandrasekhar(a)northwestern.edu<mailto:v-chandrasekhar@northwestern.edu>>, <gsgrest(a)sandia.gov<mailto:gsgrest@sandia.gov>>, <rnzuckermann(a)lbl.gov<mailto:rnzuckermann@lbl.gov>>, <ARUNAN.NADARAJAH(a)utoledo.edu<mailto:ARUNAN.NADARAJAH@utoledo.edu>>, Paul Forster <Paul.Forster(a)unlv.edu<mailto:Paul.Forster@unlv.edu>>, <p.g.bolhuis(a)uva.nl<mailto:p.g.bolhuis@uva.nl>>, <gecrooks(a)lbl.gov<mailto:gecrooks@lbl.gov>>, <theodore.randolph(a)colorado.edu<mailto:theodore.randolph@colorado.edu>>, <craigmaloney(a)cmu.edu<mailto:craigmaloney@cmu.edu>>, Mark Henle <markhenle12(a)gmail.com<mailto:markhenle12@gmail.com>>, <vvoelz(a)gmail.com<mailto:vvoelz@gmail.com>>, John Chodera <jchodera(a)gmail.com<mailto:jchodera@gmail.com>>, <Sefika.Ozkan(a)asu.edu<mailto:Sefika.Ozkan@asu.edu>>, <siege017(a)umn.edu<mailto:siege017@umn.edu>>, <ilya.chorny(a)simprota.com<mailto:ilya.chorny@simprota.com>>, <vojko.vlachy(a)fkkt.uni-lj.si<mailto:vojko.vlachy@fkkt.uni-lj.si>>, <dlmobley(a)uno.edu<mailto:dlmobley@uno.edu>>, <rbrandman(a)gmail.com<mailto:rbrandman@gmail.com>>, <vageli(a)math.unm.edu<mailto:vageli@math.unm.edu>>, <apposite(a)gmail.com<mailto:apposite@gmail.com>>, <ggf(a)stanford.edu<mailto:ggf@stanford.edu>>, <mscottshell(a)gmail.com<mailto:mscottshell@gmail.com>>, <pande(a)stanford.edu<mailto:pande@stanford.edu>>, <johnvandrie(a)mindspring.com<mailto:johnvandrie@mindspring.com>>, <dkern(a)brandeis.edu<mailto:dkern@brandeis.edu>>, <fbrown(a)chem.ucsb.edu<mailto:fbrown@chem.ucsb.edu>> Subject: looking for postdoc Dear Friends, I am looking to hire a postdoc and am writing ask if you know of any qualified and interested candidates. The work will be developing theoretical models of protein rheology and aggregation (crystalline, amyloid, particulate, etc.) My emphasis is on analytic models, but simple Monte Carlo simulations may be involved depending on the project. The job description and application instructions can be found in the link below and more details about the research can be found on my group website (see signature). http://www.phys.ksu.edu/main/jobs/2011/schmit-postdoc.html Thanks, Jeremy -- Jeremy Schmit Assistant Professor Department of Physics Kansas State University http://www.phys.ksu.edu/personal/schmit/

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[Compbio-allhands] Fwd: faculty positions in systems biology and biostatistics
by Tom Ferrin 01 Oct '11

01 Oct '11

-------- Original Message -------- Subject: faculty positions in systems biology and biostatistics Date: Sat, 01 Oct 2011 12:12:59 -0700 From: David Ojcius <david.ojcius(a)gmail.com> Reply-To: dojcius(a)ucmerced.edu To: tef(a)cgl.ucsf.edu Dear Dr. Ferrin, I'm writing to draw your attention to a search for two tenure-track faculty positions in systems biology and biostatistics that may be of interest to your post-docs or former graduate students. The positions are in the Molecular Cell Biology group at the newest campus of the University of California (UC) in Merced. Applications of special relevance to research emphases include stem cell biology, diseases such as metabolic or inflammatory disorders, and microbial systems relevant to human disease. Interested individuals can refer to the full postings at: http://jobs.ucmerced.edu/n/academic/position.jsf?positionId=3523 http://jobs.ucmerced.edu/n/academic/position.jsf?positionId=3528 Sincerely yours, David Ojcius Professor, Molecular Cell Biology University of California, Merced e-mail:dojcius@ucmerced.edu <mailto:dojcius@ucmerced.edu>

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[Compbio-allhands] Fwd: Voelz lab seeking postdoctoral candidates
by Andrej Sali 26 Sep '11

26 Sep '11

Begin forwarded message: > From: Vincent Voelz <vvoelz(a)gmail.com> > Subject: Voelz lab seeking postdoctoral candidates > Date: September 26, 2011 9:42:50 AM PDT > To: Vincent Voelz <voelz(a)temple.edu> > > Dear colleagues: > > The Voelz lab is looking for potential postdoctoral candidates to join our new group at Temple University in Philadelphia, PA. If you know of talented individuals interested in the development and application of new biomolecular simulation methods for prediction and design, please pass on our job announcement below. > > Thanks so much for your help, > > Dr. Vincent Voelz > voelz(a)temple.edu > > Assistant Professor of Chemistry > Temple University > http://voelzlab.org > > ---------------- > Postdoctoral position in biomolecular simulation at Temple University, Philadelphia, PA > > A postdoctoral position is available in the laboratory of Dr. Vincent Voelz, Department of Chemistry at Temple University, Philadelphia, PA. > > Our lab is developing new computational methods to design folding and binding properties of proteins and peptide mimetics. Projects include (1) developing Markov State Model (MSM) approaches for modeling the folding reaction and designing sequences for folding properties (2) simulation-based prediction and design of non-biological (e.g. peptoid) foldamers (3) multiscale fragment-based approaches for predicting binding affinities and specificities of protein-peptide interactions. > > Our lab benefits greatly from high-performance computing resources and collaborations available through the Institute for Computational Molecular Science (http://www.temple.edu/cst/icms) and inter-disciplinary collaborations through the new Moulder Center for Drug Discovery in the School of Pharmacy. > > More information at http://voelzlab.org > > Applicant should have a Ph.D in computational/physical chemistry, biophysics, chemical engineering, or related field, and a strong background in molecular simulation, physical chemistry, statistical mechanics of biomolecular systems, and/or computational biophysics. Relevant research experience may include: conformational sampling using molecular dynamics or Monte Carlo simulation, free energy estimation, methods for estimating protein-ligand affinities, protein structure prediction, forcefield development, multiscale modeling. > > Good programming skills are essential, as the applicant will be responsible for writing new simulation algorithms and extending existing code bases. Other relevant skills include: familiarity with simulation/modeling packages such as AMBER, GROMACS, OpenMM; Python scripting experience; familiarity with UNIX; experience with large-scale scientific computing. Experience with parallel computing and/or GPUs a plus. > > Start date: negotiable (early 2012) > Salary: Competitive and commensurate with experience. > One-year appointment, with the option to extend contingent on satisfactory progress. > > To apply: Email a cover letter and your full CV (details of all academic degrees obtained, research skills and experience, publications, conference presentations) preferrably as a single PDF, along with 2-3 letters of recommendation, to Prof. Vincent Voelz (voelz(a)temple.edu) > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Voelz lab seeking postdoctoral candidates
by Vincent Voelz 26 Sep '11

26 Sep '11

Dear colleagues: The Voelz lab is looking for potential postdoctoral candidates to join our new group at Temple University in Philadelphia, PA. If you know of talented individuals interested in the development and application of new biomolecular simulation methods for prediction and design, please pass on our job announcement below. Thanks so much for your help, Dr. Vincent Voelz voelz(a)temple.edu Assistant Professor of Chemistry Temple University http://voelzlab.org ---------------- Postdoctoral position in biomolecular simulation at Temple University, Philadelphia, PA A postdoctoral position is available in the laboratory of Dr. Vincent Voelz, Department of Chemistry at Temple University, Philadelphia, PA. Our lab is developing new computational methods to design folding and binding properties of proteins and peptide mimetics. Projects include (1) developing Markov State Model (MSM) approaches for modeling the folding reaction and designing sequences for folding properties (2) simulation-based prediction and design of non-biological (e.g. peptoid) foldamers (3) multiscale fragment-based approaches for predicting binding affinities and specificities of protein-peptide interactions. Our lab benefits greatly from high-performance computing resources and collaborations available through the Institute for Computational Molecular Science (http://www.temple.edu/cst/icms) and inter-disciplinary collaborations through the new Moulder Center for Drug Discovery in the School of Pharmacy. More information at http://voelzlab.org Applicant should have a Ph.D in computational/physical chemistry, biophysics, chemical engineering, or related field, and a strong background in molecular simulation, physical chemistry, statistical mechanics of biomolecular systems, and/or computational biophysics. Relevant research experience may include: conformational sampling using molecular dynamics or Monte Carlo simulation, free energy estimation, methods for estimating protein-ligand affinities, protein structure prediction, forcefield development, multiscale modeling. Good programming skills are essential, as the applicant will be responsible for writing new simulation algorithms and extending existing code bases. Other relevant skills include: familiarity with simulation/modeling packages such as AMBER, GROMACS, OpenMM; Python scripting experience; familiarity with UNIX; experience with large-scale scientific computing. Experience with parallel computing and/or GPUs a plus. Start date: negotiable (early 2012) Salary: Competitive and commensurate with experience. One-year appointment, with the option to extend contingent on satisfactory progress. To apply: Email a cover letter and your full CV (details of all academic degrees obtained, research skills and experience, publications, conference presentations) preferrably as a single PDF, along with 2-3 letters of recommendation, to Prof. Vincent Voelz (voelz(a)temple.edu)

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[Compbio-allhands] Fwd: IT Manager Position at J&J
by Andrej Sali 13 Sep '11

13 Sep '11

Begin forwarded message: > From: "Stephens, Susan [JRDUS]" <sstephens1(a)ITS.JNJ.COM> > Subject: IT Manager Position at J&J > Date: September 13, 2011 5:17:13 AM PDT > To: "Stephens, Susan [JRDUS]" <sstephens1(a)ITS.JNJ.COM> > > J&J is looking to hire an IT manager. > > The successful candidate will have proven experience in one or more of the following areas: > - Database technologies (RDBMS and /or document databases) > - Rich data analysis and/or visualization > - Modeling technologies > - Data Integration technologies (ETL, Semantic technologies, virtual datawarehousing) > - LIMS and/or eLN > - Search Technologies > > Please go to the following link to read the full job description and to apply: > https://jnjc.taleo.net/careersection/2/jobdetail.ftl?lang=en&job=47197 > > Cheers, > > Susie > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: Faculty Position. Biochemistry. University of Utah
by Andrej Sali 09 Sep '11

09 Sep '11

Begin forwarded message: > From: Linda VanOrden <linda(a)biochem.utah.edu> > Subject: Faculty Position. Biochemistry. University of Utah > Date: September 9, 2011 11:13:35 AM PDT > To: Linda VanOrden <linda(a)biochem.utah.edu> > Cc: Chris Hill <chris(a)biochem.utah.edu> > > Message sent on behalf of Chris Hill > > > Dear Colleague, > > The Department of Biochemistry at the University of Utah aims to hire five new tenure-track faculty members over the next few years. Our faculty is highly ranked for scholarship and we enjoy close interactions with colleagues in other School of Medicine departments as well as elsewhere on campus. A supportive, collaborative environment fosters creative science and our combined interdepartmental graduate programs in Biological Chemistry and Molecular Biology provide a good stream of outstanding students. While our emphasis is firmly on scientific excellence, we are fortunate to be located at the interface of a vibrant yet affordable city and pristine, accessible mountain wilderness. > > Our priorities for new faculty colleagues are scientific excellence and potential synergy with areas of strength in the Department and elsewhere on campus. Your research interests are among our target areas for a new faculty recruit. We hope that you will encourage especially talented postdoctorals in your lab, and other well-qualified candidates that you know, to apply to our open search via the web site: > > Department: http://medicine.utah.edu/biochemistry/ > Current Open Position: https://utah.peopleadmin.com/postings/7839 > > Many Thanks and Best Wishes, > > > > Christopher P. Hill, D.Phil. > Department Co-Chair > Distinguished Professor > Dr. Leo T. and Barbara K. Samuels Presidential Endowed Chair > Department of Biochemistry > University of Utah School of Medicine > 15 N. Medical Drive East, Rm. 4100 EEJ > Salt Lake City > Utah 84112-5650 > Tel 801.585.5536 FAX 801.581-7959 > chris(a)biochem.utah.edu -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: Mobley lab seeking postdoctoral candidates you might know
by Andrej Sali 08 Sep '11

08 Sep '11

Begin forwarded message: > From: David Mobley <dlmobley(a)uno.edu> > Subject: Mobley lab seeking postdoctoral candidates you might know > Date: September 8, 2011 8:31:25 PM PDT > To: David Mobley <dlmobley(a)uno.edu> > > Dear Colleague, > > I need your help identifying potential candidates for a postdoctoral research position in my lab in the Department of Chemistry at the University of New Orleans. If you have suitable candidates with experience in molecular simulations and/or molecular modeling who might be interested, please pass on the below information. Thanks so much for your valuable time. > > Advertisement: I seek a postdoctoral candidate with experience in molecular simulations or molecular modeling to work on an exciting research project at the interface of chemistry, physics and biology. The research focuses on extending and applying molecular dynamics-based free energy methods for predicting binding between small molecules (such as potential pharmaceutical drugs) and protein receptors. For reference, see my published work in this area. An ideal candidate would have substantial background in molecular modeling, ideally including molecular dynamics simulations and/or Monte Carlo, including applications and methodology work. Experience with free energy techniques is also a plus. Interested applicants should send a cover letter plus a CV to dlmobley(a)uno.edu. Additionally, please have at least three letters of reference sent to the same address as well. All application materials should be received by Oct. 1, 2011. Prospective applicants are welcome to contact me for more information. The position will likely start in January, 2012. > > The University of New Orleans, and the New Orleans area, provide exciting opportunities for work in this area. In addition to the Mobley Lab at UNO, we maintain close contacts with Steve Rick's group, also in Chemistry at UNO, and Chris Summa's experiment/theory group in Computer Science. Both labs have interests in molecular simulations, free energy calculations, and statistical mechanics. We also interact with the groups of Hank Ashbaugh and Lawrence Pratt at Tulane University and a variety of experimental collaborators. > > Thank you so much. > > > > Sincerely, > > David Mobley > > Department of Chemistry > > University of New Orleans > > 504-383-3662 > > > -- > David Mobley > Assistant Professor > Department of Chemistry > University of New Orleans > dlmobley(a)uno.edu > ph. 504-383-3662 > fax 504-280-6860 > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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[Compbio-allhands] Fwd: Carnegie Institution - Bioinformatics
by Hao Li 06 Sep '11

06 Sep '11

FYI --Hao -------- Original Message -------- Subject: Carnegie Institution - Bioinformatics Date: Tue, 6 Sep 2011 10:00:50 -0400 From: Christine Pratt <applicants(a)ciwemb.edu> To: Hao Li <haoli(a)genome.ucsf.edu> Dear Dr. Li, I write to call your attention to a research faculty level position now available at the Department of Embryology. Please encourage any qualified and interested individual you know of to apply. Your assistance is greatly appreciated. Sincerely, Allan Spradling, Director Department of Embryology

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[Compbio-allhands] Fwd: Call for nominations for Postdoctoral Fellowships at Princeton Center for Theoretical Science
by Hao Li 15 Aug '11

15 Aug '11

FYI --Hao -------- Original Message -------- Subject: Call for nominations for Postdoctoral Fellowships at Princeton Center for Theoretical Science Date: Fri, 12 Aug 2011 15:51:50 +0000 From: Charlene Borsack <cborsack(a)PRINCETON.EDU> Reply-To: Charlene Borsack <cborsack(a)PRINCETON.EDU> To: pcts_nominators(a)Princeton.EDU Dear Colleague, We are writing to encourage you to submit nominations for the Princeton Center for Theoretical Science Postdoctoral Fellowships. Center Postdoctoral Fellowships are the most prestigious postdoctoral positions offered in the theoretical sciences at Princeton. They are intended for early-career theoretical scientists, broadly construed, including the fields of astrophysics, biology, chemistry, geosciences, physics, and engineering. The nominees should be individuals with outstanding talent and accomplishment who are eager to broaden their scientific horizons. Fellows receive a three-year appointment in the Center fully supported by Center funds, an office in the Center facility, and have full freedom to develop their scientific interests with the support and mentoring of the resident senior Faculty Fellows. It is our intention that the Center experience will have a profound impact on the scientific development and future careers of the Fellows. *The deadline for receipt of the Postdoctoral nomination, reference letters, and supporting materials from the _nominee_, is _October 15, 2011,_ so it is important for you to submit your nomination /as soon as possible/ to give your candidate and their references time to complete their parts. ** * * * The nomination process is very simple: go to our website http://pcts.princeton.edu/pcts and submit the candidate's name, email address, and a nomination letter. The nominees will then be sent information necessary to complete their application and to submit letters for reference. The PCTS Faculty Fellows begin evaluation and invitation to interview on October 15, 2011. (The website will continue to accept late nominations and applications, but there can be no assurance they will be considered.) The mission of the Center is to foster interaction and collaboration between theorists across the natural sciences at Princeton to enhance research and education. We pursue this goal through our Center Postdoctoral Fellowships and our sponsorship of focused programs of study in frontier areas in theoretical science that cut across traditional disciplinary boundaries. A group of Senior Faculty Fellows, coming from a broad range of disciplines and departments, take active responsibility for guiding the intellectual life of the Center. Sincerely, Paul Steinhardt (Director) steinh(a)princeton.edu Igor Klebanov (Associate Director) klebanov(a)princeton.edu <mailto:klebanov@princeton.edu> Ravindra Bhatt (Acting Associate Director) ravin(a)princeton.edu <mailto:ravin@princeton.edu> /Note that Princeton University is an equal opportunity employer and complies with applicable EEO and affirmative action regulations./

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[Compbio-allhands] Fwd: Software Engineer and Bioinformatic Analysis opportunities at the Broad
by Andrej Sali 07 Aug '11

07 Aug '11

Begin forwarded message: > From: "Mark A. DePristo" <depristo(a)broadinstitute.org> > Subject: Software Engineer and Bioinformatic Analysis opportunities at the Broad > Date: August 6, 2011 4:38:01 PM PDT > To: "Mark A. DePristo" <depristo(a)broadinstitute.org> > > Hi all, > > We've opened two new positions in my group at the Broad Institute. If you are interested or know someone who is, please have them contact me at depristo(a)broadinstitute.org. > > Best, > > Mark A. DePristo, Ph.D. > Manager, Medical and Population Genetics Analysis > Broad Institute of MIT and Harvard > depristo(a)broadinstitute.org > mark(a)depristo.com > > -- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Director, California Institute for Quantitative Biosciences at UCSF Department of Pharmaceutical Chemistry University of California at San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org

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