- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] 4/2/15 Seminar with Jennifer Doudna
by Flowers, Nicole 26 Mar '15

26 Mar '15

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Jennifer Doudna UC Berkeley Signaling pathways in cancer April 2, 2015 B. DeGrado, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Company looking for a bioinformaticist (or two)
by Tom Ferrin 16 Mar '15

16 Mar '15

-------- Forwarded Message -------- Subject: Company looking for a bioinformaticist (or two) Date: Mon, 16 Mar 2015 14:02:47 +0000 From: Jose Haresco <JHaresco(a)jmpsecurities.com> To: 'tef(a)cgl.ucsf.edu' <tef(a)cgl.ucsf.edu> Hi Tom, It has been quite a while, so I hope this reaches you well. One of the companies I am working with is looking for a bioinformaticist or two. I thought I would pass the job description along in case any of the students or post-docs graduating this year are looking around. Have them contact me if they are interested. Best regards, J ------------------------- Asuragen is seeking an exceptional computational biologist to join its rapidly growing Bioinformatics group. The Sr. Scientist, Computational Biologist will function in a highly interdisciplinary environment, interacting with other Bioinformatics scientists as well as wet bench scientists and the R&D leadership to push the boundaries of diagnostic assay development and overcome computational challenges in data analysis, interpretation and visualization. Specific areas of research and development focus include: ·Application of innovative approaches to identify biomarkers predictive of disease, prognosis, and response to therapy with an emphasis on applications in oncology ·Design of new machine learning and combinatorial optimization algorithms to improve in-silico assay design processes, particularly in the areas of next-generation sequencing and digital PCR ·Development of next-generation sequencing analysis pipelines to take advantage of novel library types and capable of integrating across multiple modalities such as RNA, DNA, and epigenetic modifications. *J.T. Haresco III, Ph.D.* *Managing Director and Senior Equity Analyst*** *Medical Devices / Life Science Tools & Diagnostics* *JMP Securities, LLC* 600 Montgomery Street, Suite 1100 San Francisco, CA 94111 Direct: 415.869.4477 Cell: 415.350.7574 IMPORTANT NOTICE: This message is intended only for the addressee. If you are not the intended recipient, please notify the sender by e-mail reply and delete this message from your computer. You may not copy, disclose, distribute or otherwise make use of this message or its contents for yourself or for any other person, as that action may be unlawful. ORDERS AND INSTRUCTIONS: JMP Securities LLC does not accept action-oriented, time-sensitive instructions or transaction orders via e-mail. JMP Securities LLC will not be responsible for carrying out such instructions or orders, including orders to purchase or sell securities. IMPORTANT DISCLOSURE REGARDING Reg FD AND MATERIAL NON-PUBLIC INFORMATION: JMP Securities LLC maintains strict policies and adherence to all regulatory guidelines and rules pertaining to Reg FD and "material non-public information." Institutional and corporate clients are expected to abide by all similar rules, laws and regulations as they conduct meetings sponsored by JMP Securities LLC. CONFIDENTIALITY AND PRIVACY: JMP Group LLC. reserves the right to monitor and review the content of all e-mail communications sent and/or received by its employees.

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[Compbio-allhands] 3/12/15 BBC Seminar CANCELLED
by Flowers, Nicole 06 Mar '15

06 Mar '15

Please note: There is no BBC Seminar for 3/12/15. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Postdoc Positions
by Andrej Sali 05 Mar '15

05 Mar '15

> Begin forwarded message: > > From: "Gregory A. Voth" <gavoth(a)uchicago.edu> > To: "Gregory A. Voth" <gavoth(a)uchicago.edu>, "Voth-Group-Mailing(a)vothgroup.uchicago.edu" <Voth-Group-Mailing(a)vothgroup.uchicago.edu> > Subject: Postdoc Positions > Date: March 4, 2015 at 6:46:41 PM PST > Reply-To: gavoth(a)uchicago.edu > > > Dear Colleague, > > There is the possibility of one or more postdoc position in my group, subject to the qualifications and experience of the applicant as well as > the final availability of funding. For information on my group and our research interests please see my group web page listed below. Interested parties should contact me by email. > > Best wishes, > Greg Voth > > PS-I apologize if you get this email more than once > > __________________________________________________________________ > > Gregory A. Voth, Ph.D. > Haig P. Papazian Distinguished Service Professor > Department of Chemistry, James Franck Institute, Institute for Biophysical Dynamics, > and Computation Institute > > Department of Chemistry > The University of Chicago > 5735 S. Ellis Avenue > Chicago, Illinois 60637 > Phone: 773-702-9092 > Fax: 773-795-9106 > Administrative Assistant: 773-702-9096 > Email: gavoth(a)uchicago.edu <mailto:gavoth@uchicago.edu> > Group Web Site: vothgroup.uchicago.edu <http://vothgroup.uchicago.edu/> > Office: 231 Searle > Admin Office: 233 Searle > ___________________________________________________________________ > > > _______________________________________________ > Voth-group-mailing mailing list > Voth-group-mailing(a)vothgroup.uchicago.edu > https://vothgroup.uchicago.edu/cgi-bin/mailman/listinfo/voth-group-mailing

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[Compbio-allhands] 3/5/15 Seminar with Ruth Nussinov
by Flowers, Nicole 27 Feb '15

27 Feb '15

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Ruth Nussinov NIH Signaling pathways in cancer March 5, 2015 D. Garrido Ruiz, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] 2/26/15 Seminar with Samie Jaffrey
by Flowers, Nicole 20 Feb '15

20 Feb '15

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Samie Jaffrey Cornell Imaging RNA and RNA biology using RNA mimics of green fluorescent protein February 26, 2015 D. Weinberg, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Open PhD and Postdoc positions in Bioinformatics in Austria
by Scooter Morris 18 Feb '15

18 Feb '15

-------- Forwarded Message -------- Subject: Open PhD and Postdoc positions in Bioinformatics Date: Wed, 18 Feb 2015 23:11:33 +0100 From: Mario Albrecht <mario.albrecht(a)tugraz.at> To: mario.albrecht(a)tugraz.at Dear colleagues, Please forward these bioinformatics job offers for PhD students and Postdocs to others, thank you much! Kind regards, Mario Albrecht ================================================ Open PhD and Postdoc positions in Bioinformatics ================================================ Deadline: 28 February 2015 Contact: Prof. Dr. Mario Albrecht, Institute for Knowledge Discovery, Graz University of Technology, Graz, Austria, info(a)mario-albrecht.at Further information at http://www.medbioinf.at and below! Note: Please send your application both to info(a)mario-albrecht.at and informatik(a)tugraz.at citing the reference number 7090/15/001. Open full-time paid bioinformatics PhD student position for molecular network research until 28 February 2015, for details see http://wwww.medbioinf.at and as follows: Molecular networks and proteins are involved in many biological processes. Therefore, we aim at the development and application of computational network methods for the analysis and prediction of molecular interactions and their structural and functional changes due to sequence mutations. The mutations might occur in disease genes or bacterial and viral genomes. Based on the analysis results, we also want to develop innovative bioinformatics approaches for modeling pathways and their changes as well as for the design and prioritization of follow-up experiments. Open full-time paid bioinformatics postdoc position for integrative omics research until 28 February 2015, for details see http://bioinf.tugraz.at/images/Postdoc.pdf and as follows: Cancer is the leading cause of death and involves altered lipid metabolism. The rate-limiting enzyme in triacylglyceride degradation, the adipose triglyceride lipase (ATGL), might not participate only in lipid mobilization and degradation, but also in signaling pathways by generating lipid signaling molecules. Therefore, we aim at the large-scale elucidation of the functional role of ATGL in cancer progression using different omics strategies combined with computational approaches. Novel bioinformatics methods are developed for analyzing the data of molecular proteomics and metabolomics networks related to lipolysis in cancer. ________________________________________________________ Prof. Dr. Mario Albrecht http://www.medbioinf.at Institute for Knowledge Discovery Head of Bioinformatics Graz University of Technology Inffeldgasse 13/IV, 8010 Graz, Austria ________________________________________________________

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[Compbio-allhands] 2/19/15 Seminar with Anne-Claude Gingras
by Flowers, Nicole 13 Feb '15

13 Feb '15

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Anne-Claude Gingras Lunenfeld Kinase-phosphatase interactomes: a tale of Hippos and mulberries February 19, 2015 R. Levin, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] [Fwd: MATLAB Seminars Coming to UCSF – Feb 25, 2015]
by Patricia Babbitt 06 Feb '15

06 Feb '15

-- Patricia Babbitt Professor, Department of Bioengineering & Therapeutic Sciences and Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences Director, Graduate Program in Biological & Medical Informatics University of California, San Francisco UCSF MC 2550 Byers Hall Room508E 1700 4th Street San Francisco, CA 94158-2330, USA (CA 94158 for direct delivery by courier) Tel +1 (415) 476-3784 Fax +1 415-502-8193 Email: babbitt(a)cgl.ucsf.edu; Web http://babbittlab.ucsf.edu/ Assistant: Ms. Joslyn Polzien, +1 415-514-1214, 415-514-4861 Joslyn.Polzien(a)ucsf.edu

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[Compbio-allhands] 2/12/15 Seminar with Judith Klinman
by Flowers, Nicole 06 Feb '15

06 Feb '15

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Judith Klinman UC Berkeley Moving through Barriers: Unlocking the Mysteries of How Enzymes Really Work February 12, 2015 S. Miller, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Quantitative Student Group Series. Nicole Takesono Flowers BMI, BP, CCB, & PSPG Graduate Program Assistant UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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