- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] 11/28/12 Seminar with Greg Verdine **OFF DATE & TIME**
by Nicole Takesono Flowers 21 Nov '12

21 Nov '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems 4 pm Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Greg Verdine Harvard University Cancer Chemical Biology Wednesday, November 28, 2012 J. Wells, Host **Please note this is an off date and time seminar** BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: PhD position in bioinformatics
by Andrej Sali 20 Nov '12

20 Nov '12

-- Andrej Sali, Ph.D. Professor, Department of Bioengineering and Therapeutic Sciences Department of Pharmaceutical Chemistry California Institute for Quantitative Biosciences University of California, San Francisco UCSF MC 2552 Byers Hall Room 503B 1700 4th Street San Francisco, CA 94158-2330, USA Tel +1 (415) 514-4227; Fax +1 (415) 514-4231 Assistant: Ms. Hilary Mahon, hilary(a)salilab.org, Tel +1 (415)514-4228; Lab +1 (415) 514-4233, 4258 Email sali(a)salilab.org; Web http://salilab.org Begin forwarded message: > From: damien.devos(a)cos.uni-heidelberg.de > Subject: PhD position in bioinformatics > Date: November 20, 2012 7:33:42 AM PST > To: Michael.Rout(a)rockefeller.edu, sali(a)salilab.org, mfiedl(a)mac.com > Cc: avalencia(a)cnio.es > > Dear colleagues, thanks to publicize the available position in my lab, purely in bioinformatics: > > https://hbigs.system08.de/intern/projectspub_project_for.php?a=030000294000… > > Please let me know if you know anyone that could be interested. > Best wishes > > Damien > > **************** > Damien Devos > Center of Organismal Studies > Ruprecht-Karls-Universitat > Im Neuenheimer Feld 230 > 69120 Heidelberg, Germany > Tel: +49 (0) 6221 546254 > > > >

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[Compbio-allhands] Fwd: Research Cluster Grant Announced by Silicon Mechanics
by Tom Ferrin 14 Nov '12

14 Nov '12

From: Art Mann <research-grant(a)siliconmechanics.net<mailto:research-grant@siliconmechanics.net>> Reply-To: Art Mann <research-grant(a)siliconmechanics.net<mailto:research-grant@siliconmechanics.net>> Date: Monday, November 12, 2012 11:09 AM To: Jeff Bluestone <jeff.bluestone(a)ucsf.edu<mailto:jeff.bluestone@ucsf.edu>> Subject: Research Cluster Grant Announced by Silicon Mechanics Silicon Mechanics Announces Our Second Annual Research Cluster Grant We are pleased to again announce our sponsorship of a unique grant opportunity: A complete High Performance Compute Cluster using the latest AMD Opteron processors and NVIDIA GPUs Silicon Mechanics, a leading manufacturer of rackmount servers, storage systems, and high-performance computing solutions, is dedicated to building relationships and collaborating with professors and researchers at universities and other research institutions Last year’s Research Cluster Grant recipient, Saint Louis University, is already making productive use of their cluster, www.siliconmechanics.com/i43744/research-cluster-grant-winners-circle.php<http://www.siliconmechanics.com/i43744/research-cluster-grant-winners-circl…> This grant program is open to all US and Canadian qualified post-secondary institutions, university-affiliated research institutions, non-profit research institutions, and researchers at federal labs with university affiliations. Submissions will be reviewed for merit and related impacts. Further details on the grant rules and the technical specifications of the cluster itself are available at: http://www.siliconmechanics.com/i43822/Research+Cluster+Grant+Information.p… We hope you will consider this opportunity to support your research by submitting a proposal, or by forwarding this to others in your department who could benefit through this grant. If you have any questions, please do not hesitate to contact us at research-grant(a)siliconmechanics.com<mailto:research-grant@siliconmechanics.com>. Best regards, Art Mann Education/Research/Gov't Vertical Group Manager Silicon Mechanics 425-420-1285 artm(a)siliconmechanics.com<mailto:artm@siliconmechanics.com> Silicon Mechanics wishes to thank our partners who have helped make this grant possible: AMD · NVDIA · Mellanox · Supermicro · Seagate · Kingston Technology · Bright Computing <http://www.siliconmechanics.com/i42364/Lunch+and+Learn+Registration.php> This message was sent to you by Silicon Mechanics. We are located at 22029 23rd Dr SE, Bothell WA 98021. If you would prefer not to get any further mailings, please click here<https://www.siliconmechanics.com/mailtool/unsub.php?magic=ykrFfdI1iN1SWsyel…>.

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[Compbio-allhands] BBC Journal Club, November 20th
by Bass, Karche 14 Nov '12

14 Nov '12

BBC Journal Club BP-BMI-CCB Tuesday, November 20th, 10:45am; Genentech Hall Auditorium Ben Spangler Mi Hyeon Cho, et. al., A magnetic switch for the control of cell death signaling in in vitro and in vivo systems. Nature Materials DOI: 10.1038/NMAT3430; (2012) Peter Fellowes Cambell, KL, et. al., Substitutions in woolly mammoth hemoglobin confer biochemical properties adaptive for cold tolerance. Nature Genetics: 42(6):536-40; (2010) Karché K. Bass Karché K. Bass | Administrative Assistant Asst. to John D. Gross, Charles S. Craik, Susan Miller, and Thomas James Department of Pharmaceutical Chemistry Administration; Box 2280 | University of California, San Francisco 600 16th Street, Suite 512 (5th Floor) | San Francisco, CA *: 415-502-0523 | 7: | *: Karche.Bass(a)ucsf.edu<mailto:Karche.Bass@ucsf.edu>

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[Compbio-allhands] 11/15/12 Seminar with Robert Lamb
by Nicole Takesono Flowers 09 Nov '12

09 Nov '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Robert Lamb Northwestern University Activating protein re-folding to cause paramyxovirus-mediated membrane fusion November 15, 2012 W. DeGrado, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] BBC Journal Club, November 13th
by Bass, Karche 07 Nov '12

07 Nov '12

BBC Journal Club (BP-BMI-CCB) Tuesday, November 13th at 10:45am in GH Auditorium Amy Chang Douglas, S.m., et. al., A logic-gated nanorobot for targeted transport of molecular payloads. Science. 335(6070):831-4; (2012) Daniel Hemmelstein Reid, C.R., et. al, Slime mold uses an externalized spatial "memory" to navigate in complex environments. Proc Natl Acad Sci U S A. 109(43):17490-4 (2012) Karché K. Bass Karché K. Bass | Administrative Assistant Asst. to John D. Gross, Charles Craik, Susan Miller, Thomas James Department of Pharmaceutical Chemistry Administration; Box 2280 | University of California, San Francisco 600 16th Street, Suite 512 (5th Floor) | San Francisco, CA *: 415-502-0943 | 7: | *: Karche.Bass(a)ucsf.edu<mailto:Karche.Bass@ucsf.edu>

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[Compbio-allhands] 11/8/12 Seminar with Doug Lauffenberger
by Nicole Takesono Flowers 02 Nov '12

02 Nov '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Doug Lauffenberger MIT In Vivo Systems Analysis of Cell-Cell Communication and Signaling in Inflammation November 8, 2012 K. Giacomini, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Insight Data Science Fellows Program - applications open for 2013
by Schnoes, Alexandra 01 Nov '12

01 Nov '12

The Insight Data Science Fellows Program is accepting applications for its second season. ===================== Insight Data Science Fellows Program Applications now open for 2013 http://insightdatascience.com<http://insightdatascience.com/> Silicon Valley technology companies are hiring data scientists to help them glean insights from the terabytes of data that they collect everyday. The Insight Data Science Fellows Program<http://insightdatascience.com/> is a postdoctoral training fellowship designed to bridge the gap between academia and a career in data science. Insight highlights: * 6 week fellowship in Palo Alto, CA includes tuition scholarship and a $5,000 living expense reimbursement. * 100% placement rate for Insight Fellows who completed job search in 2012. * Insight Fellows are now data scientists at LinkedIn, Facebook, Google, Twitter, Square, Microsoft and other top tech companies. For more information and to apply for the January, June and August 2013 sessions, please visit: http://insightdatascience.com<http://insightdatascience.com/> ===================== Please feel free to forward this to any appropriate mailing lists or to anyone who might be a good candidate for the Fellows Program. Also, if anyone has any questions please have them email me directly at jake(a)insightdatascience.com<mailto:jake@insightdatascience.com>. Many thanks, Jake --- Jake Klamka Founder, Insight

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Re: [Compbio-allhands] Visit from Jerry Tsai
by Jacobson, Matt 01 Nov '12

01 Nov '12

Forwarding this to the compbio listserv -- Matt Sent from my iPad On Nov 1, 2012, at 4:35 PM, "Brett T. Hannigan" <brett.hannigan(a)gmail.com<mailto:brett.hannigan@gmail.com>> wrote: Hi Dr. Jacobson, Dr. Sali, and Dr. Kortemme, I'm a PhD student in the DeGrado lab, and just wanted to let you guys know of a seminar that we have planned for next Tuesday, November 6th and 10:00 am. We will be hosting Dr. Jerry Tsai from the University of the Pacific, and he will be delivering a talk titled "An Amino Acid Code for Protein Structure." You can find his lab's website here: http://tsailab.chem.pacific.edu/ The seminar is currently scheduled to be held on the first floor of CVRI, in room SC159. We'd love to see anyone from your lab that is interested in coming. -Brett -- ****************************************** Brett T. Hannigan Belmont, CA brett.hannigan(a)gmail.com<mailto:brett.hannigan@gmail.com> ******************************************

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[Compbio-allhands] BBC Journal Club, November 6th
by Bass, Karche 31 Oct '12

31 Oct '12

BBC Journal Club (Tuesday, November 6- 10:45 am - GH Auditorium) Greg Fedewa Borodovka A., et. al., Evidence that viral RNAs have evolved for efficient, two-stage packaging. PNAS; vol 109 no. 39; (2012) Louise Goupil Frei AP., et. al,. Direct identification of ligand-receptor interactions on living cells and tissues. Frei et al. Nature Biotechnol; doi: 10.1038/nbt.2354; (2012) Karché K. Bass Karché K. Bass | Administrative Assistant Asst. to John D. Gross, Charles Craik, Susan Miller, Thomas James Department of Pharmaceutical Chemistry Administration; Box 2280 | University of California, San Francisco 600 16th Street, Suite 512 (5th Floor) | San Francisco, CA *: 415-502-0943 | 7: | *: Karche.Bass(a)ucsf.edu<mailto:Karche.Bass@ucsf.edu>

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