- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] 4/19/12 Seminar with Alan Engelman
by Nicole Takesono Flowers 13 Apr '12

13 Apr '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Alan Engelman Harvard Retroviral integrase function and drug resistance mechanisms April 19, 2012 Bob Stroud, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] 5/31/12 Seminar with Greg Verdine- CANCELLED
by Nicole Takesono Flowers 12 Apr '12

12 Apr '12

Due to unforeseen circumstances, the seminar scheduled on 5/31/12 has been cancelled. Please stay tuned for a new speaker announcement. Thank you, Nicole Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] QBC Journal Club, Tuesday, April 17- 10:45AM, GH Aud
by Nicole Takesono Flowers 11 Apr '12

11 Apr '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, April 17 10:45 am, GH Auditorium Marian Deuker, CCB The molecular basis of acid insensitivity in the African naked mole-rat. Smith ES, Omerbasic 263; D, Lechner SG, Anirudhan G, Lapatsina L, Lewin GR. Science. 2011 Dec 16;334(6062):1557-60. Liz Howe, BMI Host Cell Invasion by Apicomplexan Parasites: Insights from the Co-Structure of AMA1 with a RON2 peptide ML Tonkin, M Roques, MH Lamarque, M Pugniere, D Douguet, J Crawford, M Lebrun, MJ Boulanger. Science 22 July 2011: Vol. 333 no. 6041 pp. 463-467. bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] 4/12/12 Seminar with Michelle Chang
by Nicole Takesono Flowers 05 Apr '12

05 Apr '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Michelle Chang UC Berkeley Building new chemical function in living organisms April 12, 2012 Kevan Shokat & Jack Taunton, Hosts BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] QBC Journal Club, Tuesday, April 10- 10:45AM, GH Aud
by Nicole Takesono Flowers 04 Apr '12

04 Apr '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, April 10 10:45 am, GH Auditorium Sarah Woldemariam, CCB Critical Role of Amyloid-like Oligomers of Drosophila Orb2 in the Persistence of Memory Cell, Volume 148, Pages 515-529, Published February 3, 2011 Kyle Barlow, iPQB Of mice and men: an Alzheimer's cure for our murine brethren ApoE-Directed Therapeutics Rapidly Clear Β-Amyloid and Reverse Deficits in AD Mouse Models Cramer, Paige E, John R Cirrito, Daniel W Wesson, C. Y. Daniel Lee, J. Colleen Karlo, Adriana E Zinn, Brad T Casali, et al. Science 335, no. 6075 (March 23, 2012): 1503-1506. bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] 4/5/12 Seminar with Ian Wilson
by Nicole Takesono Flowers 02 Apr '12

02 Apr '12

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Sytems Thursdays, 12 Noon Genentech Hall Auditorium Simulcast to Parnassus Campus S-161 Ian Wilson Scripps Broad neutralization of HIV and influenza viruses April 5, 2012 Bob Stroud, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, and the Center for Systems and Synthetic Biology. Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] Fwd: Hiring at the Friedberg lab
by Alexandra Schnoes 30 Mar '12

30 Mar '12

---------- Forwarded message ---------- From: Iddo Friedberg <idoerg(a)gmail.com> Date: Wed, Mar 28, 2012 at 8:26 AM Subject: Hiring at the Friedberg lab To: Dear Friends, Apologies for the mass email. Please pass this on to interested parties. PDF version attached. Location: Miami University, Oxford OH, USA Department: Microbiology Start date: as soon as possible Salary: competitive and commensurate with experience and qualifications The Friedberg Lab is looking to hire a Scientific Programmer/ Bioinfromatics Specialist to implement and maintain a genomic database web site; implement data management tools including relational database management applications for efficient storage and retrieval of genomic data; perform other duties as related to the position such as data and project management to ensure data are being processed in an efficient and timely manner; contribute to writing scientific manuscripts. Three year position renewed annually depending on funding and performance. *Required qualifications*: BS or BA in Computer Science, bioinformatics, or a related discipline; demonstrated programming experience, particularly in Python and SQL databases; demonstrated web programming experience; knowledge of Linux/Unix; excellent spoken and written communication and documentation skills. *Preferred qualifications*: Advanced degree (M.Sc. or Ph.D) or equivalent in Computer Science, Bioinformatics, Molecular Biology or a related discipline; experience in development of bioinformatic algorithms; knowledge of R programming; experience in development of or contribution to open source projects; experience in collaborative software development such as the use of version control software, writing and following software specifications, participation in code review; knowledge of basic molecular biology; experience with genomic browser programming, such as GMOD or equivalent. Candidates should send a CV or resume and have three letters of reference sent separately to Dr. Iddo Friedberg at friedberg.lab.jobs(a)gmail.comScreening of applications begins April 14, 2012 and will continue until the position is filled. Miami University is an affirmative action/equal opportunity employer with smoke-free campuses. Consumer Information http://www.miami.muohio.edu/about-miami/publications-and-policies/student-c…. Hard copy upon request. -- Iddo Friedberg http://iddo-friedberg.net/contact.html ++++++++++[>+++>++++++>++++++++>++++++++++>+++++++++++<<<<<-]>>>>++++.> ++++++..----.<<<<++++++++++++++++++++++++++++.-----------..>>>+.-----. .>-.<<<<--.>>>++.>+++.<+++.----.-.<++++++++++++++++++.>+.>.<++.<<<+.>> >>----.<--.>++++++.<<<<------------------------------------.

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[Compbio-allhands] QBC Journal Club, Tuesday, April 3- 10:45AM, GH Aud
by Nicole Takesono Flowers 27 Mar '12

27 Mar '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, April 3 10:45 am, GH Auditorium Aishjay Jayagopal, PSPG First-in-Human Testing of a Wirelessly Controlled Drug Delivery Microchip. R. Farra et al, Science Translational Medicine, Feb 2012. Tara Friedrich, iPQB Multiple Epigenetic Modifiers Induce Aggressive Viral Extinction in Extraembryonic Endoderm Stem Cells. M.C. Golding, L. Zhang, M.R.W. Mann. Cell Stem Cell, Volume 6, Issue 5, 457-467, 7 May 2010. bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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[Compbio-allhands] David Sivak Seminar - Monday, April 2 - 11am - 12pm, Byers Hall 212
by Hilary Mahon 26 Mar '12

26 Mar '12

Please see attached for Dr. Sivak of the Lawrence Berkeley Lab. --- Hilary Mahon Assistant to Dr. Sali University of California, San Francisco MC 2552 Byers Hall Room 503 1700 4th Street San Francisco, CA 94158-2330 Phone +1 (415) 514 4228 Fax +1 (415) 514 4231 Email hilary(a)salilab.org

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[Compbio-allhands] QBC Journal Club, Tuesday, March 27- 10:45AM, GH Aud
by Nicole Takesono Flowers 21 Mar '12

21 Mar '12

BMI ~ BP ~ CCB ~ PSPG Tuesday, March 27 10:45 am, GH Auditorium Amy Jacobson, CCB Antiparallel EmrE exports drugs by exchanging between asymmetric structures. Moarrison E.A., et al. Nature 481, 45-50 (2012). Kale Kundert, iPQB Identification of oxadiazoles as new drug leads for the control of schistosomiasis. A. Sayed, A. Simeonov, C. Thomas, J. Inglese, C. Austin and D. Williams. Nature Medicine 14, 407-412 (2008). bioinformatics ~ biophysics ~ chemistry and chemical biology ~ pharmaceutical sciences and pharmacogenomics Nicole Takesono Flowers CCB Graduate Program Assistant AMBER Software Administrator UCSF MC 2280 600 16th St. Genentech Hall Room 522 San Francisco, CA 94158-2517 Phone: (415) 502-6518 Fax: (415) 514-1546

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