- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] Fall 2020 BBC Seminar Series Quarterly Flyer
by Flowers, Nicole 27 Aug '20

27 Aug '20

Dear all, In lieu of the ability to post and view seminar notices around the building this year, please find the Fall 2020 BBC Seminar Series quarterly flyer attached to this message. Seminar notices will also be coming out via email, weekly. The full calendar for the academic year can be viewed here: https://biophysics.ucsf.edu/seminars-events/bbc-seminar-series Thank you! Nicole BBC Seminar Series Thursdays, Zoom link sent weekly Academic Year 2021 Date Speaker Topic Host 9/24/20 Allison Williams, UCSF TBD James Fraser 10/1/20 Margaret Gardel, University of Chicago Cytoskeletal Mechanosensing by LIM domains Dyche Mullins 10/8/20 Cole Trapnell, University of Washington TBD Sourav Bandyopadhyay 10/22/20 Mikhail Shapiro, CalTech Biomolecular Ultrasound for Non-Invasive Imaging and Control of Cellular Function Aashish Manglik 11/5/20 Pardis Sabeti, Harvard Outbreak Response in the Genomic Age Wren Saylor 12/3/20 Laura Kiessling, MIT Carbohydrates as Cellular IDs J. Braxton, D. Schwarz 12/10/20 Aviv Regev, Genentech Co-Sponsored with the Helen Diller Cancer Center: TBD Balyn Zaro -- Nicole Takesono Flowers she/her/hers Biophysics Graduate Program Manager UCSF MC 2240 600 16th St. Genentech Hall Room N474D San Francisco, CA 94143 P: 415.502.6518

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[Compbio-allhands] Fwd: postdoc at Lilly
by Andrej Sali 25 Aug '20

25 Aug '20

> Begin forwarded message: > > From: YAN Lisa <Lisa.YAN(a)3ds.com> > Subject: postdoc at Lilly > Date: August 25, 2020 at 12:43:04 PM PDT > To: Andrej Sali <sali(a)salilab.org> > > Hi Andrej, > > I have a customer at Lilly looking for a postdoc: > https://www.linkedin.com/jobs/view/1987007171/ <https://www.linkedin.com/jobs/view/1987007171/> > > if you have any graduates who would be interested, could you please let them contact me? Also, would appreciate if you could pass on to others who might be interested. > > Thanks, > > Lisa > This email and any attachments are intended solely for the use of the individual or entity to whom it is addressed and may be confidential and/or privileged. > If you are not one of the named recipients or have received this email in error, > (i) you should not read, disclose, or copy it, > (ii) please notify sender of your receipt by reply email and delete this email and all attachments, > (iii) Dassault Systèmes does not accept or assume any liability or responsibility for any use of or reliance on this email. > > Please be informed that your personal data are processed according to our data privacy policy as described on our website. Should you have any questions related to personal data protection, please contact 3DS Data Protection Officer at 3DS.compliance-privacy(a)3ds.com <mailto:3DS.compliance-privacy@3ds.com> > > For other languages, go to https://www.3ds.com/terms/email-disclaimer <https://www.3ds.com/terms/email-disclaimer>

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[Compbio-allhands] Fwd: EMBL Cell Biology & Biophysics Group Leader recruitment 2020
by Andrej Sali 25 Aug '20

25 Aug '20

> Begin forwarded message: > > From: Jan Ellenberg <jan.ellenberg(a)embl.de> > Subject: EMBL Cell Biology & Biophysics Group Leader recruitment 2020 > Date: August 25, 2020 at 5:01:56 AM PDT > To: Andrej Sali <sali(a)salilab.org> > > Dear Andrej, > > I would like to draw your attention to the opening for two group leader positions in the Cell Biology and Biophysics Unit at EMBL Heidelberg, as recently advertised in Nature and Science. > > We are looking for two outstanding scientists with a background in biology, physics, chemistry, engineering or mathematics who want to pursue original and interdisciplinary research in cutting-edge molecular cell biology or imaging technology development. > > In the area of cell biology, we would for example also welcome applicants that plan to work in unusual, including marine, model systems, or that take a theoretical approach to model dynamic cell biological processes. In the area of imaging technology, we would for example welcome applicants that develop novel microscopy technologies to probe the molecular or physical structure and function of cells. > > Although there is no age range, we generally hire group leaders early in their careers, often after their first postdoc and sometimes immediately after their PhD. We therefore strongly encourage highly promising young and particularly also female candidates to apply. EMBL group leaders are provided with a very generous internal support package and a highly collaborative environment. In addition, EMBL is a very inclusive and family friendly institution, including its own excellent day care on campus. > > I would very much appreciate if you could bring the attached advertisement to the attention of suitable candidates or let me know if I should contact them personally. > > Thanks so much for help with this recruitment, > > All the best, > > Jan > > Jan Ellenberg > Cell Biology and Biophysics Unit > European Molecular Biology Laboratory (EMBL) > Meyerhofstr. 1 > D-69117 Heidelberg > Germany > > T +49-6221-387-8391 > jan.ellenberg(a)embl.de <mailto:jan.ellenberg@embl.de> > www.embl.de/research/units/cbb/ellenberg/index.html <http://www.embl.de/research/units/cbb/ellenberg/index.html> > >

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[Compbio-allhands] Fwd: Somebody interested in drugging the undruggable?
by Jacobson, Matt 23 Aug '20

23 Aug '20

Several bay area biotech companies are looking for comp chemists, including the opportunity below — Matt Begin forwarded message: From: Johannes Hermann <johannes.hermann(a)frontiermeds.com<mailto:johannes.hermann@frontiermeds.com>> Subject: Somebody interested in drugging the undruggable? Date: August 21, 2020 at 2:53:51 PM PDT To: "matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>" <matt.jacobson(a)ucsf.edu<mailto:matt.jacobson@ucsf.edu>> Hi Matt, It was good talking to you recently – I was hoping for a favor – perhaps you can circulate the attached JD amongst your people – perhaps someone is looking to make a transition to industry and join an exciting startup? We would really like to work and train a junior comp chemist starting out! Thank you and have a good weekend Johannes ************************** [cid:c464279d-6d49-421d-99a1-495a8d8291da@namprd05.prod.outlook.com] Johannes Hermann, Ph.D. Chief Technology Officer https://urldefense.proofpoint.com/v2/url?u=https-3A__frontiermeds.com_&d=Dw… <https://urldefense.proofpoint.com/v2/url?u=https-3A__frontiermeds.com_&d=Dw…> STATEMENT OF CONFIDENTIALITY: The information contained in this electronic message and any attachments to this message are intended for the exclusive use of the addressee(s) and may contain confidential or privileged information. If you are not the intended recipient, or the person responsible for delivering the e-mail to the intended recipient, be advised you have received this message in error and that any use, dissemination, forwarding, printing, or copying is strictly prohibited. Please notify the sender immediately by email at Johannes.hermann(a)frontiermeds.com<mailto:Johannes.hermann@frontiermeds.com> destroy all copies of this message and any attachments. Thank you.

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[Compbio-allhands] Fwd: Computational Chemist I Opening @ Broad Institute of MIT & Harvard
by Jacobson, Matt 09 Aug '20

09 Aug '20

— Matt Begin forwarded message: From: AJ Campbell <arthurc(a)broadinstitute.org<mailto:arthurc@broadinstitute.org>> Subject: Computational Chemist I Opening @ Broad Institute of MIT & Harvard Date: August 7, 2020 at 8:33:25 AM PDT To: Matt.Jacobson(a)ucsf.edu<mailto:Matt.Jacobson@ucsf.edu> Cc: Emma Seabrook <eseabroo(a)broadinstitute.org<mailto:eseabroo@broadinstitute.org>> Hi Dr. Jacobson, I hope you're doing well! I wanted to reach out because I am looking to recruit an additional Computational Chemist to join the Center for the Development of Therapeutics (CDoT) CADD group at the Broad Institute and would love to tap your network! This position will play a critical role in supporting medicinal chemistry efforts to advance current therapeutic projects within CDoT through structure-based and ligand-based modeling approaches. Take a look at the exciting pipeline of projects we are working on: https://urldefense.proofpoint.com/v2/url?u=https-3A__www.broadinstitute.org… <https://urldefense.proofpoint.com/v2/url?u=https-3A__www.broadinstitute.org…> Here are the links to the job description: https://urldefense.proofpoint.com/v2/url?u=https-3A__broadinstitute.wd1.myw… <https://urldefense.proofpoint.com/v2/url?u=https-3A__broadinstitute.wd1.myw…> Please let me know if you have any recent PhDs or Postdocs in your program that would be interested in this role. I am happy to connect you with our recruiter, Emma Seabrook, to fill in the details - she can be reached at eseabroo(a)broadinstitute.org<mailto:eseabroo@broadinstitute.org> Let me know if you have any questions and many thanks! Best, AJ Working at CDoT<https://urldefense.proofpoint.com/v2/url?u=https-3A__www.broadinstitute.org…> - Broad Institute of MIT & Harvard Broadminded Blog: Alisha Caliman cuts across disciplines as a computational chemist<https://urldefense.proofpoint.com/v2/url?u=https-3A__www.broadinstitute.org…> CDoT Publications<https://urldefense.proofpoint.com/v2/url?u=https-3A__www.broadinstitute.org…> - CDoT's scientific leadership has an average of 15 years of Drug Discovery career experience and have advanced 32 compounds into the clinic. Together, they lead an organization of 80 research scientists and associates, 60% of whom have doctorates in relevant fields or areas of expertise. Arthur J Campbell, Ph.D. Group Leader, Senior Computational Chemist I _________________________________________ The Broad Institute of MIT and Harvard Center for the Development of Therapeutics Stanley Center for Psychiatric Research 415 Main Street, Cambridge, MA 02142 Tel 1-617-714-7372 Email ArthurC(a)BroadInstitute.org<mailto:ArthurC@BroadInstitute.org> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.BroadInstitute.org&… <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.BroadInstitute.org&…>

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[Compbio-allhands] Fwd: Update - EMBO Workshop: In situ Structural Biology - From Cryo-EM to Integrative Modelling
by Andrej Sali 28 Jul '20

28 Jul '20

> Begin forwarded message: > > From: "Tim Nuernberger" <tim.nuernberger(a)embl.de> > Subject: RE: Update - EMBO Workshop: In situ Structural Biology - From Cryo-EM to Integrative Modelling > Date: July 28, 2020 at 12:40:21 AM PDT > To: "'Andrej Sali'" <sali(a)salilab.org> > > Hi Andrej, > > We have now drafted a preliminary programme for the virtual conference which is available here: > https://www.embl.de/training/events/2020/ISS20-01/programme/index.html <https://www.embl.de/training/events/2020/ISS20-01/programme/index.html> > > Moreover please find attached an updated holding slide. Thanks for passing it on to your contacts which might be interested to join our virtual meeting as well. > > We have just re-opened registration and have already 74 registrations for it. > > Thanks a lot. > > Best wishes > Tim > >

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[Compbio-allhands] Fwd: Open University Professorship at the Max Perutz Labs, Vienna
by Andrej Sali 20 Jul '20

20 Jul '20

> Begin forwarded message: > > From: <deans-office(a)mfpl.ac.at> > Subject: Open University Professorship at the Max Perutz Labs, Vienna > Date: July 20, 2020 at 2:13:31 PM PDT > To: <sali(a)salilab.org> > Cc: "Alwin Koehler" <alwin.koehler(a)univie.ac.at>, "'Sascha Martens'" <sascha.martens(a)univie.ac.at> > > Dear Dr. Sali, > Please find attached a letter regarding an open call for a University Professorship of “Advanced Microscopy and Cellular Dynamics” at the Max Perutz Labs in Vienna. > We think that this an exciting opportunity and would greatly appreciate if you could inform qualified candidates from your laboratory or institute about this position. > Kind Regards, > Alwin Köhler & Sascha Martens >

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[Compbio-allhands] Fwd: Structural Biology Postdoctoral Fellow
by Andrej Sali 06 Jul '20

06 Jul '20

> Begin forwarded message: > > From: "Fesik, Stephen" <stephen.fesik(a)Vanderbilt.Edu> > Subject: Structural Biology Postdoctoral Fellow > Date: July 6, 2020 at 10:29:42 AM PDT > To: Andrej Sali <sali(a)salilab.org> > > Dear Andrej, > > Thank you for forwarding my email last year to your student and postdoc email list at UCSF. I am looking for talented postdocs again and would greatly appreciate your help. > > I am writing to ask your assistance in identifying talented and highly accomplished structural biologists with a desire to join our group as a postdoctoral fellow. > > As you know, my lab is a multidisciplinary team, comprised of structural biologists, medicinal chemists, and cell biologists, committed to discovering and developing novel therapeutics for the treatment of cancer. We use fragment-based methods and structure-based design to discover small molecule inhibitors for highly validated oncology targets such as K-Ras, Mcl-1, and WDR5 (Please see: https://lab.vanderbilt.edu/fesik-lab/ <https://lab.vanderbilt.edu/fesik-lab/>). > > Postdocs in our group will have the opportunity to learn and apply cutting edge fragment-based methods and structure-based approaches to design analogs of hit molecules to improve binding affinities. The close collaborations between synthetic chemists, cancer biologists, and structural biologists in our group will provide excellent training in drug discovery in a team environment. > > The ideal candidate will have a Ph.D. in NMR or X-ray crystallography with experience in the cloning and purification of proteins for structure determination. If you have a student that fits these criteria, please have them provide a cover letter describing their relevant experience, a curriculum vitae, and a short research summary of their work to stephen.fesik(a)vanderbilt.edu <mailto:stephen.fesik@vanderbilt.edu>. > > If you know of a colleague that may have an interested student, please feel free to forward this contact info to them as well. > > Sincerely, > Steve > > Stephen W. Fesik, Ph.D. > Professor of Biochemistry, Pharmacology, and Chemistry > Orrin H. Ingram, II Chair in Cancer Research > Vanderbilt University School of Medicine > 2215 Garland Ave, 607 Light Hall > Nashville, TN 37232-0146 > > Office: 634 RRB > Phone: (615) 322-6303 > Fax: (615) 875-3236 > Email: stephen.fesik(a)vanderbilt.edu <mailto:stephen.fesik@vanderbilt.edu> > Website: Fesik Lab <http://www.mc.vanderbilt.edu/fesiklab> > > >

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[Compbio-allhands] Fwd: Open position in my lab
by Andrej Sali 07 Jun '20

07 Jun '20

> Begin forwarded message: > > From: "Brock, Oliver" <oliver.brock(a)tu-berlin.de> > Subject: Open position in my lab > Date: June 7, 2020 at 10:52:07 AM PDT > To: "sali(a)salilab.org" <sali(a)salilab.org> > > Dear Andrej, > > I hope you and the people close to you are well in these complicated times! > > I am one of Juri Rappsilber's collaborators. In the middle of these crises, I am attempting to fill a position in my lab for a computational biology PhD student with five years of funding. I would greatly appreciate if you could pass along this information to interested parties. I am including brief instructions on how to apply below. > > Thanks for your help! > > Best regards, > Oliver > > ------------- > > Link to the official job ad: > https://tub.stellenticket.de/de/offers/80437/?ids=t281 > > If you are interested in applying: Please email your application as a single PDF file to robotics(a)robotics.tu-berlin.de, specifying IV-302/20 in the subject line. In the PDF file, please include a cover letter explaining your motivation and relevant qualifications, CV, selected publications and/or MS thesis, references, transcripts, and degree certificates. >

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[Compbio-allhands] 5/7/2020 BBC Seminar with Polly Fordyce, PhD
by Flowers, Nicole 29 Apr '20

29 Apr '20

BBC Graduate Programs Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, Noon Zoom: https://urldefense.proofpoint.com/v2/url?u=https-3A__ucsf.zoom.us_j_1992348… Password: 266055 Polly Fordyce, Ph.D. Stanford Leveraging microfluidics for high-throughput biophysics, biochemistry, and single-cell biology May 7, 2020 S. Floor, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. -- Nicole Takesono Flowers Biophysics Graduate Program Manager UCSF MC 2240 600 16th St. Genentech Hall Room N474D San Francisco, CA 94143 P: 415.502.6518

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