- compbio-allhands@cgl.ucsf.edu - RBVI Mailing Lists

[Compbio-allhands] Summer 2022 Gladstone Data Science Training Program
by Zainab Yusufsada 27 Jun '22

27 Jun '22

<https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> View in Your Browser <https://mailchi.mp/gladstone/summer-2022-gladstone-data-science-training-pr…> GLADSTONE DATA SCIENCE PROGRAM*Bioinformatics Series Summer 2022* The Gladstone Data Science Training Program <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> provides learning opportunities and hands-on workshops to improve your skills in bioinformatics and computational analysis. Gain new skills and get support with your questions and data. The Data Science Training Program is virtual. Register for one or more of the workshops offered and you’ll learn helpful skills and get hands-on experience to master the bioinformatic tools you need to analyze your data. Summer 2022 Series <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> Introduction to R for Data Analysis <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> *Ayushi Agrawal, Michela Traglia* July 12 & 14, 2022 • 9am–12pm PDT Register <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> Introductory RNA-Seq <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> *Ayushi Agrawal, Michela Traglia* July 21–22, 2022 • 9am–12pm PDT Register <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> Hypothesis Testing <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> *Reuben Thomas* August 15-16, 2022 • 1–3pm PDT Register <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> Intermediate RNA Seq Analysis Using R <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> *Michela Traglia, Min-Gyoung Shin* September 13, 2022 • 9am–12pm PDT Register <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> VIEW THE SERIES <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> The Gladstone Data Science Training Program <https://gladstoneinstitutes.us10.list-manage.com/track/click?u=1a62a392ffda…> was started in 2018 to provide trainees with learning opportunities and hands-on workshops to improve their skills in bioinformatics and computational analysis. This program offers a series of workshops throughout the year to enable trainees to gain new skills and get support with their questions and data. View in Your Browser <https://mailchi.mp/gladstone/summer-2022-gladstone-data-science-training-pr…> © 2022 Gladstone Institutes. All rights reserved. Want to change how you receive these emails? Update your preferences <https://gladstoneinstitutes.us10.list-manage.com/profile?u=1a62a392ffda799e…> or unsubscribe from this list. <https://gladstoneinstitutes.us10.list-manage.com/unsubscribe?u=1a62a392ffda…> Gladstone Institutes 1650 Owens Street San Francisco, CA 94158 Add us to your address book <https://gladstoneinstitutes.us10.list-manage.com/vcard?u=1a62a392ffda799ebd…> Cordially, *Zainab Yusuf Sada* | Administrative Specialist Gladstone Institute of Data Science & Biotechnology 1650 Owens Street, San Francisco, CA 94518 T 415.734.4827|zainab.yusufsada(a)gladstone.ucsf.edu

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[Compbio-allhands] Fwd: Looking for a compchemist
by Brian Shoichet 24 Jun '22

24 Jun '22

FYI ---------- Forwarded message --------- From: Daniel Ortwine <dortwine(a)nestedtx.com> Date: Fri, Jun 24, 2022 at 11:27 AM Subject: Looking for a compchemist To: shoichet(a)cgl.ucsf.edu <shoichet(a)cgl.ucsf.edu> Cc: Aysegul Ozen <aozen(a)nestedtx.com> Hi Brian, As you are aware I am consulting for Nested Pharmaceuticals (as well as Genentech). They are looking for a computational chemist, preferably with MD and some scripting experience. I attached the job description here. The hiring manager is Aysegul Ozen (copied here), who you know... Would you by chance have or know of any students or postdocs finishing up (or others, for that matter) that might be interested in working for Nested? I would very much appreciate you sending any candidates my way. Hopefully I'll see you at a future conference - I'll be at ACS Chicago this August and hopefully at the Gordon CADD conference next summer. Thanks in advance! Cheers, Dan Ortwine Ortwine Consulting LLC -- Brian Shoichet, Professor, UCSF latest science from the lab: *https://bkslab.org/ <https://bkslab.org/>*

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[Compbio-allhands] Summer 2022 Gladstone Data Science Training Program
by Zainab Yusufsada 21 Jun '22

21 Jun '22

The Gladstone Data Science Training Program provides learning opportunities and hands-on workshops to improve your skills in bioinformatics and computational analysis. Gain new skills and get support with your questions and data. The Data Science Training Program is virtual. Register for one or more of the workshops offered and you’ll learn helpful skills and get hands-on experience to master the bioinformatic tools you need to analyze your data. Summer 2022 Series <https://gladstone.org/events?series=data-science-training-program> Introduction to R for Data Analysis Session 1-2 July 12 & 14, 2022 Register <https://gladstone.zoom.us/meeting/register/tJcsfuGupzwiGtce9atpUdrFzu_oJRKM…> Introductory RNA-Seq, Session 1-2 July 21-22,2022 Register <https://gladstone.zoom.us/meeting/register/tJEoceiqqzgvGtyOAA2Gs6Xw8SspY4G3…> Hypothesis tTesting Session 1-2 August 15-16, 2022 Register <https://gladstone.zoom.us/meeting/register/tJ0of-uqrzwvGd3BhiiYSxb7P2iMNS7U…> Intermediate RNA Seq Analysis Using R September 13, 2022 Register <https://gladstone.zoom.us/meeting/register/tJUpf-CsrTwsHNQwLJg8w_3QH0Jtfl83…>

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[Compbio-allhands] UPDATED: 6/30/22 Seminar with Hao Wu, Noon, GH Auditorium
by Flowers, Nicole 21 Jun '22

21 Jun '22

________________________________ From: Kwong, Michelle <Michelle.Kwong(a)ucsf.edu> Sent: Tuesday, June 21, 2022 11:48 AM To: Flowers, Nicole <Nicole.Flowers(a)ucsf.edu> Subject: Re: Vallee **UPDATED** Sorry!! Hi All, Hope you’re doing well! We have a special guest, Hao Wu, Ph.D., coming from Harvard Medical School. She will be holding a seminar about the inner workings of the inflammasome engine on Thursday, June 30th, 2022 from 12pm-1pm in Byers Auditorium in Genentech Hall, Mission Bay. Please see the flyer for more details. Anyone is welcome to come. We’re looking forward to seeing you there! Thank you!! Best, Michelle

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[Compbio-allhands] 6/30/22 Seminar with Hao Wu, Noon, GH Auditorium
by Flowers, Nicole 21 Jun '22

21 Jun '22

Hi All, Hope you’re doing well! We have a special guest, Hao Wu, Ph.D., coming from Harvard Medical School. She will be holding a seminar about the inner workings of the inflammasome engine on Friday, June 30th, 2022 from 12pm-1pm in Byers Auditorium in Genentech Hall, Mission Bay. Please see the flyer for more details. Anyone is welcome to come. We’re looking forward to seeing you there! Thank you!! Best, Michelle

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[Compbio-allhands] Fwd: AI/ML research opportunities at Genentech Research
by Lyu, Jiankun 15 Jun '22

15 Jun '22

FYI Begin forwarded message: From: "Kangway Chuang (CHUANGK4)" <chuang.kangway(a)gene.com<mailto:chuang.kangway@gene.com>> Subject: AI/ML research opportunities at Genentech Research Date: June 15, 2022 at 2:48:04 PM PDT To: jiankun.lyu(a)ucsf.edu<mailto:jiankun.lyu@ucsf.edu> This Message Is From an External Sender This message came from outside your organization. Dear JK, I wanted to pass along opportunities that may interest any graduating students or postdocs you might know. We have a few positions in my lab in the new Department of AI and ML within Genentech Research and Early Development. It's a unique balance of academic-style research with a focus on publishing with the opportunity to impact our real drug discovery efforts while collaborating with scientists across the entire organization. 1. We have one opening for a Postdoctoral Fellow with sponsorship for up to 4 years. Postdocs at Genentech are well-compensated, have a tremendous amount of intellectual freedom, and have a strong emphasis on publishing. Postdoctoral Fellow, Artificial Intelligence and Machine Learning in Drug Discovery<https://urldefense.com/v3/__https://careers.gene.com/us/en/job/GENEUS202206…> 2. There are additionally two open positions for full-time employees in our AI/ML department with a focus on machine learning for drug discovery. Again, there's flexibility in their exact focus depending on research interests, with opportunities to work on both applied and foundational machine learning problems, e.g. in geometric deep learning, virtual screening, molecular optimization, chemical reactions, and much more: AI Scientist / Sr. AI Scientist - Artificial Intelligence and Machine Learning<https://urldefense.com/v3/__https://careers.gene.com/us/en/job/GENEUS202205…> AI Scientist / Sr. AI Scientist - Artificial Intelligence and Machine Learning in Drug Discovery<https://urldefense.com/v3/__https://careers.gene.com/us/en/job/GENEUS202203…> Please don't hesitate to reach out if you have any questions and thanks in advance. All my best, Kangway Chuang, Ph. D. (he/him/his) Senior AI Scientist and Group Lead AI | ML Department in Research Biology Genentech Research and Early Development +1 (805) 754-0058 chuang.kangway(a)gene.com<mailto:chuang.kangway@gene.com>

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[Compbio-allhands] 6/2/22 BBC Seminar with Jiaoyang Jiang, PhD, Noon
by Flowers, Nicole 25 May '22

25 May '22

BBC Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, Noon Zoom: http://tiny.ucsf.edu/pUYmCK Please do not share this link outside of UCSF Jiaoyang Jiang, PhD University of Wisconsin-Madison Decoding sweet regulation at substrate-level implications for signaling disease. June 2, 2022 J. Weaver, Host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. Subscribe to the BBC Seminar Series Calendar! Use this URL to access this calendar from a web browser.<https://urldefense.com/v3/__https://calendar.google.com/calendar/embed?src=… > Use this address to access this calendar from other applications.<https://urldefense.com/v3/__https://calendar.google.com/calendar/u/1?cid=cz… > Use this URL to view and open the calendar in iCal and/or Outlook.<https://urldefense.proofpoint.com/v2/url?u=https-3A__ucsf.us20.list-2Dmanag…>

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[Compbio-allhands] Fwd:
by Brian Shoichet 19 May '22

19 May '22

FYI. ---------- Forwarded message --------- From: Peter Schultz <schultz(a)scripps.edu> Date: Thu, May 19, 2022 at 7:24 AM Subject: To: shoichet(a)cgl.ucsf.edu <shoichet(a)cgl.ucsf.edu> Brian, we are looking for computational chemists to do structure-based design at Calibr as a PI. If you know of anyone that might be interested, I would love to chat with them. Thanks, Pete -- Brian Shoichet, Professor, UCSF latest science from the lab: *https://bkslab.org/ <https://bkslab.org/>*

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[Compbio-allhands] 5/19/22 BBC Seminar with Liz Kellogg, PhD
by Flowers, Nicole 13 May '22

13 May '22

BBC Seminar Series Bioinformatics Biophysics Chemistry & Chemical Biology Complex Biological Systems Thursdays, Noon Genentech Hall Byers Auditorium Livestream: http://tiny.ucsf.edu/Y5D1RO Liz Kellogg, PhD Cornell University Mechanisms driving molecular innovation: Cryo-EM studies of CRISPR-associated transposons May 19, 2022 D. Chen, host BBC Seminars are supported by the Biophysics, Bioinformatics, and Chemistry & Chemical Biology IFM, Department of Pharmaceutical Chemistry, QBC, HARC Center, the Center for Systems and Synthetic Biology, and the Gladstone Center for Cell Circuitry. Subscribe to the BBC Seminar Series Calendar! Use this URL to access this calendar from a web browser.<https://urldefense.com/v3/__https://calendar.google.com/calendar/embed?src=… > Use this address to access this calendar from other applications.<https://urldefense.com/v3/__https://calendar.google.com/calendar/u/1?cid=cz… > Use this URL to view and open the calendar in iCal and/or Outlook.<https://urldefense.proofpoint.com/v2/url?u=https-3A__ucsf.us20.list-2Dmanag…> To view recorded lectures, click here: https://lecture.ucsf.edu/ets/Channel/0671978c87c64a7db9251cff75b922505f

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[Compbio-allhands] Fwd: Hiring two people - share in your group? Connect soon?
by Andrej Sali 12 May '22

12 May '22

> Begin forwarded message: > > From: "James Arnold (ARNOLJ12)" <arnold.james(a)gene.com> > Subject: Hiring two people - share in your group? Connect soon? > Date: May 12, 2022 at 12:26:18 PM PDT > To: sali(a)salilab.org > > This Message Is From an External Sender > This message came from outside your organization. > Hi Andrej, > > I hope you are doing well, and I'd love to connect and catch up as your time allows. > > I am hiring for two roles, and looking for two great people. Here are the links to the postings. If you have a chance, could you please share with your groups, and others within our larger UCSF community? These two people can really make a difference, I think they will benefit from being on the team, and I'd appreciate your help finding them. > > Principal Data Scientist, Genentech > https://careers.gene.com/us/en/job/202203-109575/Senior-Principal-Data-Scie… <https://urldefense.com/v3/__https://careers.gene.com/us/en/job/202203-10957…> > > Lead/Senior Data Engineer, Genentech > https://careers.gene.com/us/en/job/GENEUS202204117622EXTERNALENUS/Lead-Seni… <https://urldefense.com/v3/__https://careers.gene.com/us/en/job/GENEUS202204…> > > Are there good times to connect in the coming weeks? > > Jim > > > James Arnold, PhD > Director, Data Science and Artificial Intelligence > Genentech > m: 415-216-5655, e: arnolj12(a)gene.com <mailto:faretta@gene.com>

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